Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03245 ATGGCGGTAGGACTCTCCGCCGCCGTAACCTTGAAGCCCCTCCTCCGCCTCCACCACCCCCACTTCCCCAAGTCAATCCCAGCTACACTCCCTTTCTCTCCCTTGAGAATTTCCCACCACACAACCTTCCTAAGGACCCAAAAGTTGTCACCTTTCACCGTCTGTGTCCTCATGCAGGACCCCAAACAGAGCACCCACATGGAAATTGAGGAGCAGGAACAACAACCAGCTTCCCCTCCACAAGTTTTGTCACCAAAGTTGGCAGAGAAATTGGCTAGAAAAGAGTCCGAGAGGTTTACCTACCTCGTTGCTGCTGTCATGTCTAGCCTCGGGGTCACATCCATGGCAGTGTTTGCTGTTTATTATCGATTCGCGTGGCAAATGGAGGGTGGAGAAGTGCCTTGGTCTGAAATGTTCGGCACATTTGCTCTGGCAGTGGGTGCTGCTGTGGGTATGGAGTTTTGGGCTAGATGGGCTCATAGGGCTCTCTGGCATGCTTCTTTGTGGCACATGCACGAGTCCCACCATCGACCAAGAGAAGGACCCTTCGAACTGAACGATGTATTTGCCATAACAAATGCTGTCCCTGCCATCGCTCTCCTTTCGTACGGTTTCTTTCACAAGGGACTCATCCCTGGTCTTTGCTTCGGTGCGGGTCTTGGAATTACTGTGTTTGGGATGGCCTACATGTTTGTTCACGATGGTTTGGTTCATAAGAGATTCCCTGTGGGCCCCATTGCCAACGTCCCCTACTTCAGAAGAGTGGCTGCTGCTCACCAACTTCACCATTCGGAAAAATTCGATGGTGTACCATATGGGCTGTTTTTGGGACCAAAGGAAGTTGAAGAGGTGGGAGGGCTAGAAGAGCTGGAGAAAGAGATAAGTAGGAGAGCAAAATCATACAAAAAAAGTTAA 915 0.5071 MAVGLSAAVTLKPLLRLHHPHFPKSIPATLPFSPLRISHHTTFLRTQKLSPFTVCVLMQDPKQSTHMEIEEQEQQPASPPQVLSPKLAEKLARKESERFTYLVAAVMSSLGVTSMAVFAVYYRFAWQMEGGEVPWSEMFGTFALAVGAAVGMEFWARWAHRALWHASLWHMHESHHRPREGPFELNDVFAITNAVPAIALLSYGFFHKGLIPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIANVPYFRRVAAAHQLHHSEKFDGVPYGLFLGPKEVEEVGGLEELEKEISRRAKSYKKS 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03245 304 Pfam Fatty acid hydroxylase 148 275 IPR006694 GO:0005506|GO:0008610|GO:0016491
Spst4g03245 304 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 1 302 IPR045019 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03245 Spst-Chr4 72178465 72180972 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g03245 1 218 Chloroplast and Mitochondria Gene Families AT4G25700 61.261 6.52e-91 268
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03245 4 72178465 72180972 Spst10g00929 10 10048286 10050000 ECH
Spst4g03245 4 72178465 72180972 Spst4g03245 4 72178465 72180972 ECH
Spst4g03245 4 72178465 72180972 Spst10g00929 10 10048286 10050000 PCT