LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst4g03239	ATGCCATCTGGAAGGATCATATCCTCTCATTCTTCCATGGAGACTCAAAAGCTAATTTTACATCTCATTTTTCTCCTTTTAATTCCTTGTACATCCTCTTTCACTCCCATAGCTAACTACCTTATTAGCTGTGGATCACAGAATAATGCTTCTTTCTTCAACCGCATCTTTACGAGTGATTCCGCCAACCAAGGCTCAACTTTTCTCTCTGCTGACAAATCCATTTCCCTCACCAACCAAAACCCTCCTCCAGATTTGCCCATTTTGTATCACACTGCAAGAGTTTTTCCCAGCACTGGAAGCTACAGGTTCGACATGAGGAGGAATGGCATCCACTTGGTTCGTTTTCATTTCTCAACTTTTAAGGCTCAAGGGTTTGATCTAAAATCTGCTAACTTTAGTATCCTGGTTGATAGTAATTTGGTGCTTAGAAATTTCAAGCCAACTAATGGTGTTCTGCTTAAGGAGTTTATTCTTAAGATAGAGTCAAATTTGCTTGAAATTGTGTTTAGACCTGAAGGTAATTCAGGTTTTGGCTTTGTCAATGCTATGGAGGTGTTTACTGCTCCTGTTGATTTTGTTATAGATTATGGAGCTAGGTTGGTGGGTCCTTTTGGTGTGATAGAGTACAAGAACCTTTCATCTCATGTTTTGGAAACTGTCCATAGGATTAATGTTGGGGGTGTGAAAGTAACTGCCTTTAATGACACCCTTTGGAGGACTTGGATTCCTGATGAGGAATTTCTGGTTTTTAAGGATGCTGCTAAGACTGCGGTGACCACTCAGACACCAAATTATCAGAAGGGAGGAGCCACCCGAGAGATAGCGCCAGATAGTGTTTATATGACTGCTCAAGTAATGGATAAGGATCACGCCATTATAGCTTCACAGTTCAACATAACCTGGGATTTTCCAGTGGCTCCAGGTGGTGTTCGACATTTGGTTCGGTTGCATTTTTGTGATATTGTTAGTCCTGCTCTTAATTTGCTCTACTTTAATGTGTATATCAACGGATATTCTGCATACAAGGATCTGGATTTGTCGTCTCTTACAGTCCATGTGCTTGCATCTCCGGTATACGTGGATTTTGTAGCAGATTCTGATGATTCAGGTGTTATTCGAATAAGTGTTGGCCCTTCTGAACTGAGCAGTTCTATGAGGATGAATGCCATTTTGAATGGGGCAGAGATAATGAGGCTGGTGAATGTTGAGGACTCGCGCGTTGTTCCTGGGAAGAAGAGGTTGTGGATGTTGGTGGGTTCAATTACAGGTGGTGGTATTGTTGTTTTGCTTTTAGTTGTATCTGCTTTTCTACTTGCTCTCAAATACAGGAAGAAGAAGAAGAAGAAGAAACCAAAACAAAGGACACTGGAAAGTGTAGGATGGACACCGTTACGTGTGTTTGGAGGGAGTTCACTTAGTAGAATGTCTGAAGGGACAGCTTTTCCTTCTCCTGGTTCTTATGGTTATTTTGGATTGAGAATCCCTTTTGCTGATATACAATTAGCCACAAACAATTTTGATAGAAATCTAATAATAGGATCTGGTGGTTTTGGTCTGGTTTACAAAGGAGTGCTCAAAGACAATGTGAAAGTTGCAGTCAAGAGAGGCATGCCTGGATCAAGACAAGGCCTTCCTGAATTCCAGACTGAAATAACAATCTTATCCAAAATTCGCCATCACCATCTTGTTTCACTAGTTGGATATTGTGAAGAAAATTCAGAGATGATACTAGTCTATGAGTATGTGGAAAAAGGTCCACTCAAAAAGCATCTATATGGGTCAGCAGGACATGCACGTTTGTCTTGGAAGCAGCGGCTTGAGATATGCATTGGTGCAGCTAGAGGTCTTCACTATCTACACACCGGTTTCGCGCAAGGAATCATACACCGTGACATCAAATCAACCAATATTTTGGTGGATGAAAACTATGTCGCCAAAGTTGCTGATTTTGGTCTTTCAAGATCTGGACCTTGTCTCAATGAAACCCATGTGAGTACTGGTGTGAAAGGAAGTTTTGGTTATCTTGATCCTGAGTATTTCCGAAGGCAGCAGCTTACAGATAAGTCAGATGTTTACTCATTTGGGGTTGTGCTTTTTGAGGTTCTTTGTGCCAGAGCTGCTGTCGATCCTCAACTTGATAGAGAACAAGTGAACTTAGCCGAATGGGCACTTGAATGGCAGAAAAAGGGCATGCTGGAGCATATTATTGATCCTTATCTTGTTGGGAAGATAAAGCAAAGCTCACTGAAGAAATTTGGTGAAACAGCAGAGAAATGTTTAGCTGAATATGGCGTTGATAGGCCAACTATGGGTTCTGTATTGTGGAATTTGGAATATGCACTTCAGCTCCAAGAAAGTGAACAAGAAGAGGAGCCATATGATGATAGCAGTGCTCAGGAAACAGTGAATGTGCCAACTACAATAACTCCTGGAAGTCCTAGCAACATAAGAAGAGAGGGAGATAATGATAATGGTTATTCAGATGTAAGTGCTACTGAAGTTTTTTCTCAACTAATGAAGAGTGAAGGTAGATAG	2538	0.4113	MPSGRIISSHSSMETQKLILHLIFLLLIPCTSSFTPIANYLISCGSQNNASFFNRIFTSDSANQGSTFLSADKSISLTNQNPPPDLPILYHTARVFPSTGSYRFDMRRNGIHLVRFHFSTFKAQGFDLKSANFSILVDSNLVLRNFKPTNGVLLKEFILKIESNLLEIVFRPEGNSGFGFVNAMEVFTAPVDFVIDYGARLVGPFGVIEYKNLSSHVLETVHRINVGGVKVTAFNDTLWRTWIPDEEFLVFKDAAKTAVTTQTPNYQKGGATREIAPDSVYMTAQVMDKDHAIIASQFNITWDFPVAPGGVRHLVRLHFCDIVSPALNLLYFNVYINGYSAYKDLDLSSLTVHVLASPVYVDFVADSDDSGVIRISVGPSELSSSMRMNAILNGAEIMRLVNVEDSRVVPGKKRLWMLVGSITGGGIVVLLLVVSAFLLALKYRKKKKKKKPKQRTLESVGWTPLRVFGGSSLSRMSEGTAFPSPGSYGYFGLRIPFADIQLATNNFDRNLIIGSGGFGLVYKGVLKDNVKVAVKRGMPGSRQGLPEFQTEITILSKIRHHHLVSLVGYCEENSEMILVYEYVEKGPLKKHLYGSAGHARLSWKQRLEICIGAARGLHYLHTGFAQGIIHRDIKSTNILVDENYVAKVADFGLSRSGPCLNETHVSTGVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARAAVDPQLDREQVNLAEWALEWQKKGMLEHIIDPYLVGKIKQSSLKKFGETAEKCLAEYGVDRPTMGSVLWNLEYALQLQESEQEEEPYDDSSAQETVNVPTTITPGSPSNIRREGDNDNGYSDVSATEVFSQLMKSEGR	845

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst4g03239	845	PANTHER	OS07G0166700 PROTEIN	494	785	IPR045272	GO:0004714\|GO:0006468
	Spst4g03239	845	ProSitePatterns	Protein kinases ATP-binding region signature.	513	535	IPR017441	GO:0005524
	Spst4g03239	845	Pfam	Malectin-like domain	42	399	IPR024788	-
	Spst4g03239	845	FunFam	Putative receptor-like protein kinase	39	190	-	-
	Spst4g03239	845	CDD	STKc_IRAK	513	779	-	-
	Spst4g03239	845	Gene3D	Transferase(Phosphotransferase) domain 1	583	805	-	-
	Spst4g03239	845	MobiDBLite	consensus disorder prediction	798	829	-	-
	Spst4g03239	845	FunFam	receptor-like protein kinase FERONIA	475	582	-	-
	Spst4g03239	845	FunFam	Receptor-like protein kinase FERONIA	583	795	-	-
	Spst4g03239	845	MobiDBLite	consensus disorder prediction	786	829	-	-
	Spst4g03239	845	Pfam	Protein tyrosine and serine/threonine kinase	512	772	IPR001245	GO:0004672\|GO:0006468
	Spst4g03239	845	ProSiteProfiles	Protein kinase domain profile.	507	781	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Spst4g03239	845	Gene3D	-	217	400	-	-
	Spst4g03239	845	Gene3D	-	38	192	-	-
	Spst4g03239	845	Gene3D	Phosphorylase Kinase; domain 1	487	582	-	-
	Spst4g03239	845	SUPERFAMILY	Protein kinase-like (PK-like)	490	782	IPR011009	-
	Spst4g03239	845	SMART	serkin_6	507	781	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Spst4g03239	845	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	628	640	IPR008271	GO:0004672\|GO:0006468
	Spst4g03239	845	FunFam	Receptor-like protein kinase FERONIA	217	402	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst4g03239	Spst-Chr4	72124246	72127419	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Spst4g03239	18	845	Receptor kinase-like Gene Family	AT3G46290	49.475	0.0	753

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Spst4g03239		Malectin_like	6.3e-32	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst4g03239	-		-	gmx:100814974	1425.22