Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03227 ATGGCAGGTGAGGTGCTGAAGAAGGAGGAGTCCCTAAACCTCAAAATCACTAACAAGAGTCATGTGCAACCTGAGGAGAAAATTGGGAGGAAAGAGTACCAGTTGGTCACTTTTGATCTTCCCTACTTGGCCTTCTACTACAACCAGAAGCTACTGTTTTACAAAGGGGAGGACTTTGATGGCATGGTTCAGAAGCTGAAAGTTGGACTTGGTGTAGTCCTGAAAGAGTTCCACCAACTAGCTGGAAAGTTAGGGAAAGATGAAGAGGGGGTGTTTAGGGTTGAGTATGATGATGACTTGCTTGGTGTGGAGGTTGTTGAAGCTGTTGCTCATGAAATTGGTGTGGATGATCTAACTGTGGCTGAAAGTACCAGCAATCTGTTGGAGCTGATACCTTATACTGGTATCTTGAATTTGGAAGGCATGCATAGACCTTTGCTGGCAGTTCAGTTAACGAAGCTGAAAGATGGGCTTGCAATGGGCCTAGCCTTCAACCATGCTGTGTTGGACGGGACTGCCACGTGGCAATTCATGACCTCGTGGGCTGAGATTTGCAGTGGTTCCCCGTCCACGTCGGCACCACCCTTCCTGGACCGGACTAAGGCCCGGAACACGCGAGTGAAGCTGGACCTCTCACTGCCGGAGCCCAACGACCCACCAACTTCCAATGGCGAGGCAAAGCCCAATCCTACTCTGAGGGAAAAGATATTTAAATTCTCCGACTCAAAGATCGATAAGATCAAGTCAACGGTCAATGAGAACCCTCCATCGGACGGCTCAAAACCGTTCTCAACATTTCAGGCTCTTTCCTCCCATGTTTGGCGCCATGTAAGCCATGCACGTAAGTTGAAGCCGGAGGACTACACCGTGTTCACCGTCTTCGCCGACTGCCGCAAGCGGGTCGACCCACCGATGCCGGAGACTTATTTCGGAAACCTAATTCAGGCTATATTTACTGTTACCGCGGTCGGGCTTTTAACGGCTCATCCTCCACAATTTGGAGCTTCATTAGTTCAGAAAGCCATTGAAGCTCATAATGCAAAAGCTATTGATGAACGTAACAAGGAGTGGGAGAGTGCCCCCAAAATTTTCCAATTCAAAGATGCTGGGGTGAATTGTGTGGCAGTGGGAAGCTCCCCAAGGTTTAAGGTTTATGACATTGATTTCGGGTGGGGGAAGCCAGAGAATGTGAGGAGTGGAACTAATAACAAGTTTGATGGGATGATTTACTTGTATCCAGGGAAGAATGGAGGGAGGAGCATCGATGTGGAACTAACCTTGGAGCCTGAGGCTATGGGGAGGTTGGAGGAAGACAAGGATTTTCTTTTGGAAGCATAG 1338 0.4865 MAGEVLKKEESLNLKITNKSHVQPEEKIGRKEYQLVTFDLPYLAFYYNQKLLFYKGEDFDGMVQKLKVGLGVVLKEFHQLAGKLGKDEEGVFRVEYDDDLLGVEVVEAVAHEIGVDDLTVAESTSNLLELIPYTGILNLEGMHRPLLAVQLTKLKDGLAMGLAFNHAVLDGTATWQFMTSWAEICSGSPSTSAPPFLDRTKARNTRVKLDLSLPEPNDPPTSNGEAKPNPTLREKIFKFSDSKIDKIKSTVNENPPSDGSKPFSTFQALSSHVWRHVSHARKLKPEDYTVFTVFADCRKRVDPPMPETYFGNLIQAIFTVTAVGLLTAHPPQFGASLVQKAIEAHNAKAIDERNKEWESAPKIFQFKDAGVNCVAVGSSPRFKVYDIDFGWGKPENVRSGTNNKFDGMIYLYPGKNGGRSIDVELTLEPEAMGRLEEDKDFLLEA 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03227 445 Gene3D - 11 212 IPR023213 -
Spst4g03227 445 MobiDBLite consensus disorder prediction 210 231 - -
Spst4g03227 445 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 16 442 - -
Spst4g03227 445 Gene3D - 215 437 IPR023213 -
Spst4g03227 445 Pfam Transferase family 14 441 - -
Spst4g03227 445 FunFam Tryptamine hydroxycinnamoyl transferase 218 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03227 Spst-Chr4 71984137 71986928 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g03227 64 444 Monolignol Biosynthesis Gene Families AT5G48930 26.933 3.60e-36 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03227 K19747 - gmx:100818158 825.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03227 4 71984137 71986928 Spst4g03227 4 71984137 71986928 ECH