Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03219 ATGGCACTGGCTCCTCCTCCAACAGTTGTCCTTGGTTCAATAGCCTTTGCAATCTTTTGGGTTCTAGCAGTTTTCCCATGTGTGCCTTTTCTACCTATTGGGAGAACTGCAGGGTCCCTACTAGGTGCAATGCTTATGGTCATATTCCAAGTTCTTACTCCAGATCAAGCTTTTGCTGCAATTGATATCCCAATTCTTGGTCTTCTTTTTGGGACAATGGTTGTCACTATTTTTCTTGAAAGAGCAGACATGTTCAAGTACTTGGGGAAATTGCTCTCATGGAAAAGCAGAGGACCAAAAGACTTACTTTGTAGAATCTGTCTGATTTCTGCTATTTCAAGTGCTTTTTTCACCAATGACACCTCTTGTGTTGTATTGACTGAATTTGTGTTGAAAATTGCAAGGCAGCATAACCTCCCACCTTACCCTTTCCTTCTTGCACTTGCTTCAAGTGCTAATATTGGGTCCTCAGCAACCCCAATTGGGAACCCCCAGAATCTGGTTATAGCCATTCAAGGTAAAATATCATTTGGCAGTTTTCTAACCGGCATTCTTCCAGCTATGCTTGTAGGAGTTGTAGTGAATATTGTAATTCTTATAGCCATGTATTGGAGGGTATTAACTGTGCATAAGGATGAAGAGGATCCAATTTCAGAAGTTGCAGAAGAGGAGGTTATGTCCCATCAGTTTTCTCCAGCTATAATGACTCATTTTGCATCCTCTAATTCTGAAGAATGTAATGACAGTTCAGAACCTACTAATAATCTTCAAAATTCTACACAAGTTATGGCAAACCAAACATTCCCAAGTTTAAGTGAAGTTCAGATGGCTCTTAGTAGCACAAACGCAATGGATTCCACAACAAGTGCAAATGCACCCAAGGGAACCAATGATACAAACGAGGAAACTAATCCTTCAAAAGATGTTGCACTAGTAGTAGATAAACCTATAGAAGCACGTGTTATGCACTCTTCAGAAGGAAAGGAGGACTACTTGAGCAGAAAATGGAAAAGGATTTTATGGAAATCTTGTGTTTATGTAATCACATTGATGATGCTGATTGCAATGCTTCTTGGTGTAAATATGGCATGGGCTGCAATTGCAGCTGCAATAATTTTGGTGGTGCTTGATTTCAAAGACGCAGGACCAAGCATAGAGAAGGTCTCGTATTCACTTCTCATATTCTTCTGTGGAATGTTTATCACAGTTGATGGCTTCAAAAAAACTGGAATTCCAAGTGCTCTGTGGGACTTAATGGAGCCTTATTCTAGAATTGATCATGCTACTGGAATAGCTACACTTGCCATAGTTATACTAGTCCTATCAAATTTGGCTTCAAATGTACCAACTGTTCTGTTGCTTGGAGCACGAGTTGCAGCTTCAGCTGCTGCAATTTCCAAAGAAGATGAGAAGAAAGCATGGCTAATCCTAGCTTGGGTAAGCACCATAGCAGGAAACTTTTCACTGTTAGGATCAGCTGCCAACTTGGTTGTCTGTGAACAAGCTCGCAGAGCTCCAAACATTGGATACACATTAACCTTTTGGACTCATCTCAAATTTGGTCTTCCTTCAACTCTTATAGTCACTGCTATTGGATTGACACTCATAAAATAA 1614 0.4027 MALAPPPTVVLGSIAFAIFWVLAVFPCVPFLPIGRTAGSLLGAMLMVIFQVLTPDQAFAAIDIPILGLLFGTMVVTIFLERADMFKYLGKLLSWKSRGPKDLLCRICLISAISSAFFTNDTSCVVLTEFVLKIARQHNLPPYPFLLALASSANIGSSATPIGNPQNLVIAIQGKISFGSFLTGILPAMLVGVVVNIVILIAMYWRVLTVHKDEEDPISEVAEEEVMSHQFSPAIMTHFASSNSEECNDSSEPTNNLQNSTQVMANQTFPSLSEVQMALSSTNAMDSTTSANAPKGTNDTNEETNPSKDVALVVDKPIEARVMHSSEGKEDYLSRKWKRILWKSCVYVITLMMLIAMLLGVNMAWAAIAAAIILVVLDFKDAGPSIEKVSYSLLIFFCGMFITVDGFKKTGIPSALWDLMEPYSRIDHATGIATLAIVILVLSNLASNVPTVLLLGARVAASAAAISKEDEKKAWLILAWVSTIAGNFSLLGSAANLVVCEQARRAPNIGYTLTFWTHLKFGLPSTLIVTAIGLTLIK 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03219 537 MobiDBLite consensus disorder prediction 282 306 - -
Spst4g03219 537 Pfam Citrate transporter 28 484 IPR004680 GO:0016020|GO:0055085
Spst4g03219 537 PANTHER TRANSPORTER ARSB-RELATED 1 536 - -
Spst4g03219 537 CDD YbiR_permease 28 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03219 Spst-Chr4 71887797 71889662 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g03219 38 225 Antiporters AT3G19490 25.373 3.46e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03219 - - gmx:100792256 889.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03219 4 71887797 71889662 Spst10g00942 10 10170457 10174653 PCT