Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03200 ATGCACAGGTGGGTGAGGCCCGATGATAAACAGAGGGTGTTTTTGAATCTCACTTATTCGTATCTAATTCAAGCTTGTGTGATTATAATAGTTGAGATGGAATTTAGCATCACATCAAGAGAAACCATTAAACCGTCATTGCCCACTTCTAGAGAATGCAAAACCCTAAAATTATGCTTGTTTGATGTGTTTCAACTCAACACCTATTTTCCATTAATCCTTTTTTACTGCAAAACCAACCTTCAGGGATTCTCAGATGTCTCAACTCAATTGAAGAGATCACTATCTGAGGCACTGACTATTTTCTACCCTCTTGGAGGTAGAAGATGTGATCACTTCTCCATTGATTGTAATGATGAAGGTGCAATTTACATGGAAGCTTCAGTGAATACCAACATGGAAGTGTTCTTAACACCACCCAAATTGGAACTGCTAAACAAATTACTTCCATGTGAACCTAACAAGTGTCATCCTCACCAAGAAGTCTTGCCCCAACTACTTGTTCAAGTAAATCTTTTCCAATGTGGAGGCATAGCTATTGGTTTGTGCAACCTCCACATCCTCTTGGATGCATATTCTTGCAGTGCCTTCTTGAAAACCTGGTTTGCCATTTGCAAAGGGTCAAAGGAAGAAATATCATGGCCAGATTTCTTTTCTGCTTCCTCTTCCTTCCCTCCCAGAAACACCATTGGTGTACGTGCTGGCATGTTGAATCTTAACAAACACTTGAATATAGAAGAAAACTGCACCACAAGAAGATTCTTATTTGATTGCAAAGCCATCAATGAGTTAAAATCCATGTCAACAAGTGATGAAACAAAACCTACAAGATACCAAGTAGTATCTTCATTCATATGTAAACATATGATTGTAGCAATCAAGGAGAAATCCTGTGACAAAACAAGACCAATGGTTGCACTACATGTTGTGGACATGAGAAAAAGAATGGGAGAGCCTTTCTCAAAAGGTGCTATTGGAAATTTGTTGTGGCCTGCATTGATTCTCTTTGAGGATGTTAACAAGAACACTGATGTTACAAATTTGGTTAAAATTCTAAAAGAAGGACTTGGAAAACTCACTAAGGATTTGTTTCTAAAATTACAGAATGATCCTAATTTTTTGTGGAGTGATGAGTGTGCAGAACTAATGCTTGAAAGTATAGCAGCAAATAACCCAATTTCTTTAGTGTTCACAAGTTGGGCTAATATGGGATTCAATGAGGTGGATTTTGGTAGTGGAAAACCTTTGTGGCTAGCTCAAAGAGGAGGTACTAAAGAAACAATTCCAAACACAGTGGTATTGATGGAAACAAGAGAGGGAATAGAGGCATGGATCACAATGGCAGAGAAACATATAACTCTCTTGGAAGATGATGTTGACTTCCTTCGTTTTGCATTGCTTAATCCTAGTATTTCATTTTAA 1422 0.379 MHRWVRPDDKQRVFLNLTYSYLIQACVIIIVEMEFSITSRETIKPSLPTSRECKTLKLCLFDVFQLNTYFPLILFYCKTNLQGFSDVSTQLKRSLSEALTIFYPLGGRRCDHFSIDCNDEGAIYMEASVNTNMEVFLTPPKLELLNKLLPCEPNKCHPHQEVLPQLLVQVNLFQCGGIAIGLCNLHILLDAYSCSAFLKTWFAICKGSKEEISWPDFFSASSSFPPRNTIGVRAGMLNLNKHLNIEENCTTRRFLFDCKAINELKSMSTSDETKPTRYQVVSSFICKHMIVAIKEKSCDKTRPMVALHVVDMRKRMGEPFSKGAIGNLLWPALILFEDVNKNTDVTNLVKILKEGLGKLTKDLFLKLQNDPNFLWSDECAELMLESIAANNPISLVFTSWANMGFNEVDFGSGKPLWLAQRGGTKETIPNTVVLMETREGIEAWITMAEKHITLLEDDVDFLRFALLNPSISF 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03200 473 Gene3D - 246 463 IPR023213 -
Spst4g03200 473 Gene3D - 32 233 IPR023213 -
Spst4g03200 473 PANTHER F21J9.9 36 465 - -
Spst4g03200 473 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Spst4g03200 473 Pfam Transferase family 36 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03200 Spst-Chr4 71668645 71675600 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g03200 71 456 Monolignol Biosynthesis Gene Families AT5G48930 24.029 1.13e-18 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03200 - - gmx:102667966 719.924