Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03156 ATGGATATGTTTGGTGCAGGAACTGATACACCCTTACAGATCCTAGAATGGGCTATGACAGAACTCTTGAGACATCCTAATGTGATGCTCAAACTACAAGTTGAGGACATGTTTGGTGCAGGAACTGATACCACTCTTGCAGTCCTAGAATGGGCTATGACAAAACTCTTGAGGCACCCCAATGTGATGCAGAAACTACAAGTTGAGGTGAGAAGCATGGCTAGGGACAAGACTCACATAACTGAGGAGGATTTGAGTGGCATGTCTTACTTAAAAGCAGTGATTAAAGAAATTCTTAGATTACATCCTCCATCTCCCATATTGATTCCAAGGGAATCCATGCAAGACACCAAAGTGATGGGCTATGACATTGCAATTGGCACACAAGTACTAGTCAATGCTTGGGCAATTTCCGCACACCCTTCCTATTGGGATAAACCTCTGGAGTTTCAACCACAAAGATTCTTGAGGAGTTGGATAGATATCAAAGGACATGATTTGGAACTGGTTCCATTTGGAGCAGGAAAAAGGGGTTGTCCAGGAATAGTTTTTGCCATGGTTGTGAATGAGTTGGTGCTTGCAAACATTGTGCACCAATTTGATTGGACTGTGCCTGGTGGAGTGGTGGGGGAACAAACACTTTGTATGTCTGAAACTACTGGATTAACTGTTCATAGAAAATTACCCCTTGTGGCTCTTGCATCACCTTATATGTAA 717 0.4282 MDMFGAGTDTPLQILEWAMTELLRHPNVMLKLQVEDMFGAGTDTTLAVLEWAMTKLLRHPNVMQKLQVEVRSMARDKTHITEEDLSGMSYLKAVIKEILRLHPPSPILIPRESMQDTKVMGYDIAIGTQVLVNAWAISAHPSYWDKPLEFQPQRFLRSWIDIKGHDLELVPFGAGKRGCPGIVFAMVVNELVLANIVHQFDWTVPGGVVGEQTLCMSETTGLTVHRKLPLVALASPYM 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03156 238 SUPERFAMILY Cytochrome P450 30 234 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03156 238 PANTHER CYTOCHROME P450 71B11-RELATED 1 35 - -
Spst4g03156 238 SUPERFAMILY Cytochrome P450 1 35 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03156 238 Pfam Cytochrome P450 30 216 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03156 238 PRINTS E-class P450 group I signature 179 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03156 238 PRINTS E-class P450 group I signature 92 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03156 238 PRINTS E-class P450 group I signature 49 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03156 238 PRINTS E-class P450 group I signature 29 46 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03156 238 PRINTS E-class P450 group I signature 133 157 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03156 238 PRINTS E-class P450 group I signature 169 179 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03156 238 PRINTS P450 superfamily signature 170 179 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03156 238 PRINTS P450 superfamily signature 40 57 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03156 238 PRINTS P450 superfamily signature 93 104 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03156 238 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 172 181 IPR017972 GO:0005506|GO:0016705
Spst4g03156 238 Gene3D Cytochrome P450 30 232 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03156 238 FunFam Predicted protein 37 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03156 Spst-Chr4 71136283 71141342 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g03156 27 238 Cytochrome P450 AT3G48280 49.296 2.26e-72 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03156 - - gmx:100813357 355.525