Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03155 ATGTCCACCTCTCTGCATGAATACTCTTCAAGCTTGGTTTTGCTCCTAATCTTTACCTTGATCTTCCTCTTTTTACATACTGCCATCAATCTTTTATCTAAACGGAATCATAATTTCAATTCTGCAATGATAAGAAAACCCCCACCTCCATCTCCTCCAAAGCTTCCAATAATAGGAAACCTCCACCAACTTGGCACCCTCCCTCACCGCACTCTCCATTCCTTTGCTCAAAGCTATGGCCCTGTAATGTTACTTCACTTTGGAAAGGTGCCAATTCTTGTGGCCTCAACAGCTGAGGCAGCTCGTGAGGTTATGAAAACCCATGACCTTGTTTTCTCCAATAGACCACATCGTAAGATGTTTGATATAATCTTGTACGGTTCAAAAGATGTGGCATCTGCTCCATATGGCAACTACTGGAGGCAGATAAGGAGTATAAGTGTCTTGCATCTTCTCAGTGCCAAAAAGGTTCAATCCTTTGGTGCATTGAGAGAAGAGGAAATCTCCACAATGATGGAAGAGATCAAGCAGGGCTGCTCTTCTTCGATGTCTGTGAATTTAACTGATTTATTCTCTACTGTCACGAATAACATAGTGTGTAGAGCTGCTCTCGGAAGGAGATACAGTGGAGAAGGAGGGACTAAGCTTCGGGGGCCATTGAATGAGATGATGGAGCTGCTGGGTGCTTCAGCTGTAGGGGACTACGTCCCTTGGCTTGATTGGTTGGGAAGTGTTAATGGAACTTATGGTAGGGCAAAGAGAGTGGCTAAACAGCTTGATGAATTTTTTGATGAAGTTGTTGAGGAGCATGTTAGTAAGAGAGGGCATGATGCGCATGGTGATGATGAAATGAAGAATGATTTGGTGGACAATTTGTTGAGGATCCAAAAAACAGATGCCATGGGGTTTCAGATTGATAGAACAATCATAAAGGCTTTGATCCTGGATGGGTATTTGTTTCAGGATATGTTTGTAGCAGGTACTGAAACTAGCTCCTCAATCCTAGAGTGGATAATGACAGAACTCTTAAGGCACCCAATTGTGATGCAGAAGCTACAAGGTGAGGTGAGGAATGTGGTCAGTGGTAGAACTCACGTAACTGAGGAAGATTTAAGCAGCATGCATTACTTGAAGGCAGTGATCAAAGAAACTTTTCGATTACATCCCCCAGCTCCCTTGTTGCTTCCAAGGGAATCCATGGAAGATGCCAAAGTGATGGGTTATGACATTGCAAAGGGCACACAAGTAATAGTGAATGCTTGGGCAATTGGAAGAGATGGTTCTTATTGGGAGCAACCTCTGGAGTTCAAACCAGAGAGATTCTTAAATAGTTCAATAGATGTGAGAGGACATGATTTTGAAGTGATACCATTTGGAGCAGGAAGGAGGGGATGTCCAGGAATAACGTTTGCCATGAATGAGATTGAGCTGGTCCTAGCAAACCTTGTTCACCAATTTGATTGGGAAGTGCCTGGTGGAGTAGTGGGGGATCGGACACTGGACATCACTGAAACTGCTGGGTTAACCAATCGTAGAAAATGGCCGCTGATTGCAATTGCATCCCATCCTGCATAA 1575 0.4375 MSTSLHEYSSSLVLLLIFTLIFLFLHTAINLLSKRNHNFNSAMIRKPPPPSPPKLPIIGNLHQLGTLPHRTLHSFAQSYGPVMLLHFGKVPILVASTAEAAREVMKTHDLVFSNRPHRKMFDIILYGSKDVASAPYGNYWRQIRSISVLHLLSAKKVQSFGALREEEISTMMEEIKQGCSSSMSVNLTDLFSTVTNNIVCRAALGRRYSGEGGTKLRGPLNEMMELLGASAVGDYVPWLDWLGSVNGTYGRAKRVAKQLDEFFDEVVEEHVSKRGHDAHGDDEMKNDLVDNLLRIQKTDAMGFQIDRTIIKALILDGYLFQDMFVAGTETSSSILEWIMTELLRHPIVMQKLQGEVRNVVSGRTHVTEEDLSSMHYLKAVIKETFRLHPPAPLLLPRESMEDAKVMGYDIAKGTQVIVNAWAIGRDGSYWEQPLEFKPERFLNSSIDVRGHDFEVIPFGAGRRGCPGITFAMNEIELVLANLVHQFDWEVPGGVVGDRTLDITETAGLTNRRKWPLIAIASHPA 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03155 524 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03155 524 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03155 524 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03155 524 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03155 524 Pfam Cytochrome P450 49 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03155 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Spst4g03155 524 PANTHER CYTOCHROME P450 71B11-RELATED 24 521 - -
Spst4g03155 524 PRINTS E-class P450 group I signature 100 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03155 524 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03155 524 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03155 524 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03155 524 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03155 524 PRINTS E-class P450 group I signature 194 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03155 524 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03155 524 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03155 524 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03155 524 Gene3D Cytochrome P450 37 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03155 524 FunFam Cytochrome P450 83B1 37 519 - -
Spst4g03155 524 SUPERFAMILY Cytochrome P450 49 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03155 524 CDD CYP71-like 79 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03155 Spst-Chr4 71127215 71129188 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g03155 49 521 Cytochrome P450 AT3G48310 50.844 8.51e-174 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03155 - - gmx:100806940 749.199