Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03154 ATGTGGCATGTGTTTTACCTTGTGGATATGTTTGGTGCAGGAACTGATACCACCCTTGCAGTCCTAGATTGGGCTATGACAGAACTCTTGAGGCACCCCAATGTGATGCAGAAACTACAAGTTGAGGTGAGAAGCATGGCTAGGGATAAGACTCACATAAATGAGGAGGATTTGAGTGGCATGTCTTACTTAAAAGCAGTGATTAAAGAAATTCTTAGATTACATCCTCCATCTCCCATAATGATTCCAAGGGAATCCATGCAAGACACCAAAGTGATGGGCTATGACATTGCAATTGGCACACAAGTACTAGTGATGTGA 321 0.4268 MWHVFYLVDMFGAGTDTTLAVLDWAMTELLRHPNVMQKLQVEVRSMARDKTHINEEDLSGMSYLKAVIKEILRLHPPSPIMIPRESMQDTKVMGYDIAIGTQVLVM 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03154 106 PRINTS P450 superfamily signature 13 30 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03154 106 PRINTS P450 superfamily signature 66 77 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03154 106 PANTHER CYTOCHROME P450 71B11-RELATED 7 105 - -
Spst4g03154 106 Gene3D Cytochrome P450 4 106 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03154 106 SUPERFAMILY Cytochrome P450 5 105 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03154 106 Pfam Cytochrome P450 8 105 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03154 106 Coils Coil 36 56 - -
Spst4g03154 106 PRINTS E-class P450 group I signature 2 19 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03154 106 PRINTS E-class P450 group I signature 65 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03154 106 PRINTS E-class P450 group I signature 22 48 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03154 Spst-Chr4 71117833 71118333 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g03154 7 105 Cytochrome P450 AT3G48270 53.535 8.39e-35 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03154 - - aprc:113866669 172.17