Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03153 ATGACGTATTTTCTCAGTGGAACCTTCTTCTTGTGGTTCTTCATTTCCATGTTAGCATTCTTCATCTTACTAGCCTTTCCCACAATATTCAATCTTCTATCCAAACTGAATTCCAATTCACACAAAAAATCACCACCATCTCCTCCAAAGCGTCCAATAATAGGAAATCTCCACCAACTTGGCACCCTCACTCACCACACTCTCCAATCCTTTGCTCAAACATATGGCCCTTTAATGTTGCTTCACTTCGGGAAGGTTCCAGTTCTTGTGGTCTCAAATACTGAAGCAGCACGTGAGGTTTTGAAAACCCAAGACCACGTTTTCTGCAACAGACCACATCGTAAGATGTTTGATATCTTCTGGTATGGTTCCAGAGATGTAGCATCTGCTCCATATGGTCACTACTGGAGGCAGGTGAAGAGTATATGTGTGTTGCATCTTCTCAGTGCCAAAAAGGTTCAGTGCTTTCGTAAAGTGAGGGAAGAGGAAGTTGTAGTAATGATAGAGAAAGTTATGGAGAGTTGTTCTTCTTTGGTGCCAGTGAACTTGACTGACTTGTTCTCTGATGTGACAAATGATATAGTGTGTAGGAGTGTTATTGGAAGGAGATATGAAGGGAGTGAGCTTAGGGGGCCAATGAGCCAGTTGGAAGAGTTGTTGGGGGCTTCAGTTATAGGGGACTATATACCTTGGCTTGATTGGTTAGGAAGGGTTAATGGAATGTATGGTAGAGCAGAGAGAGTGGCTAAAAGGCTTGATGAATTTTTGGATGAGGTTGTCGATGAGCATGTTAGTATGAGAAGCCATTATGGGCATGGTGATGATGTTGATGGTGAAAGGCAGAATGATTTTGTGGACATCTTGCTGGGGATTCAGAGAACAAGCTCCACCACAGATTTTCAGATTGATAGGACTATCATTAAGGCTTTGATCATGGATATGTTTGGTGCAGGAACTGATACTACCCTTGCAGTCCTAGAATGGGCTATGACAGAACTCTTGAGGCACCCCAATGTGATGCAGAAACTACAAGTTGAGGTGAGAAGCATGGCTAGGGACAAGACTCACATAACTGAGGAGGATTTGAGTGGCATGTCTTACTTAAAAGCAGTGATTAAAGAAATTCTTAGATTACATCCTCCATCTCCCATATTGATTCCAAGGGAATCCATGCAAGACACCAAAGTGATGGGCTATGACATTGCAATTGGCACACAAGTACTAGTCAATGCTTGGGCAATTTCCACAGACCCTTCGTATTGGGATAAACCTCTGGAGTTTCAACCAGAAAGATTCTTGAGGAGTTGGATGGATATCAAAGGACATGATTTGGAACTGGTTCCATTTGGAGCAGGAAGAAGGGGTTGTCCAGGAATAGCTTTTGCCATGGTTGTGAATGAGTTGGTGCTTGCAAACATTGTGCACCAATTTGATTGGACTGTGCCTGGTGGAGTGGTGGGGGAACAAACACTTTGTATGTCTGAAACTACTGGATTAACTGTTCATAGAAAATTACCCCTTGTGGCTCTTGCATCACCTTATATGTAA 1548 0.4283 MTYFLSGTFFLWFFISMLAFFILLAFPTIFNLLSKLNSNSHKKSPPSPPKRPIIGNLHQLGTLTHHTLQSFAQTYGPLMLLHFGKVPVLVVSNTEAAREVLKTQDHVFCNRPHRKMFDIFWYGSRDVASAPYGHYWRQVKSICVLHLLSAKKVQCFRKVREEEVVVMIEKVMESCSSLVPVNLTDLFSDVTNDIVCRSVIGRRYEGSELRGPMSQLEELLGASVIGDYIPWLDWLGRVNGMYGRAERVAKRLDEFLDEVVDEHVSMRSHYGHGDDVDGERQNDFVDILLGIQRTSSTTDFQIDRTIIKALIMDMFGAGTDTTLAVLEWAMTELLRHPNVMQKLQVEVRSMARDKTHITEEDLSGMSYLKAVIKEILRLHPPSPILIPRESMQDTKVMGYDIAIGTQVLVNAWAISTDPSYWDKPLEFQPERFLRSWMDIKGHDLELVPFGAGRRGCPGIAFAMVVNELVLANIVHQFDWTVPGGVVGEQTLCMSETTGLTVHRKLPLVALASPYM 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03153 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Spst4g03153 515 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03153 515 PRINTS E-class P450 group I signature 190 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03153 515 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03153 515 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03153 515 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03153 515 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03153 515 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03153 515 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03153 515 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03153 515 Pfam Cytochrome P450 45 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03153 515 Gene3D Cytochrome P450 32 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03153 515 PANTHER CYTOCHROME P450 71B11-RELATED 24 511 - -
Spst4g03153 515 SUPERFAMILY Cytochrome P450 45 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03153 515 CDD CYP71-like 74 507 - -
Spst4g03153 515 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03153 515 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03153 515 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03153 515 FunFam Cytochrome P450 83B1 32 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03153 Spst-Chr4 71101243 71103655 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g03153 17 512 Cytochrome P450 AT3G48270 48.902 2.67e-172 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03153 - - gmx:100813357 820.846