Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03152 ATGTCTGATTCCAAAGATGTGGCATCTGCTCAATATGGCAACTACTGGCGGCAGATGAGGAGTATTTGTGTCTTGCATCTTCTCAGTGCAAAAAAGGTTCAATCCTTTGGTTCAGTGAGAGAAGAAGAAGTCTCCGTAATGATAGAAGAGATTAAGCAAGTTGCTCTCGGAAAGAGATACAGTGGAGAACGAGGGACTAAACTTCGGGAGCCATTGAATGAGATGATGGATCGGCTGGGTGGTATAGTTATAGGGGACTACATACCTTGGCTTGATTGGTTGGGAACAGCCAATGGTATGTATGGTAGGGCAAAGAGAGTGGCTAAACAGCTTGATGTATTTTTTGATGAAGTTGTTGATGACCATGTCAGTAAGAGAGAGCATGATGGGCATGGCTATGATGATGATGAAGAAGAGCAGAATGATTTGGTGGACATTTTGTTGAATATCCAAAAGACAGAAGCCACGGGGTTCCAGATTGATAGAACAACCATAAAGGCATTAATCATGTACCTCCTCAATCCTAGAGTGGATAATGACAGAACTCTTGAGACACCCAATTGTGATGCAGAGCTACAAGGTGAGGTCAGGAATGTGGTTAGTAGTAAAACTCGCGTGACTGAGGAAGATTTAAGCAGCATGCATTACATGAAGGCAGTGGTTAAAGAAACTTTTCGATTGCATCCCCCAGCTCCCTTATTGCTTCCAAGGGAGTCCATGGTAGACACTAAAGTGATGGGTTATGACATTGCAAAGGGCACACAAGTAATAGTGAATGCTTGGGCAATTGGAAGAGATCCTTCTTATTGGGAGCAACCTTTGGAGTTCCAACCAGAGAGATTCTTAAATAGTTCAATAGATTTGAAAGGACATGATTTTGAAGTGATACCATTTGGAGCAGGAAGGAGGGGCTGTCCAGGAATAACGTTTGCCATGAATGAGATTGAACTGGTCCTAGCAAACCTTGTTCACCATTTTAATTGGGAAGTGCCTAGTGGAGTACAGGGGCTTCAGACACTAGACATAGCTGAAACTACTGGGTTGTCCATGCGTAGAAAATTCCCTCTCATGGCAATTGCATCCCATCCTGCATAA 1095 0.4329 MSDSKDVASAQYGNYWRQMRSICVLHLLSAKKVQSFGSVREEEVSVMIEEIKQVALGKRYSGERGTKLREPLNEMMDRLGGIVIGDYIPWLDWLGTANGMYGRAKRVAKQLDVFFDEVVDDHVSKREHDGHGYDDDEEEQNDLVDILLNIQKTEATGFQIDRTTIKALIMYLLNPRVDNDRTLETPNCDAELQGEVRNVVSSKTRVTEEDLSSMHYMKAVVKETFRLHPPAPLLLPRESMVDTKVMGYDIAKGTQVIVNAWAIGRDPSYWEQPLEFQPERFLNSSIDLKGHDFEVIPFGAGRRGCPGITFAMNEIELVLANLVHHFNWEVPSGVQGLQTLDIAETTGLSMRRKFPLMAIASHPA 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03152 364 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 298 307 IPR017972 GO:0005506|GO:0016705
Spst4g03152 364 PRINTS P450 superfamily signature 156 173 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03152 364 PRINTS P450 superfamily signature 219 230 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03152 364 PRINTS P450 superfamily signature 296 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03152 364 PRINTS P450 superfamily signature 305 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03152 364 FunFam Predicted protein 180 358 - -
Spst4g03152 364 PANTHER CYTOCHROME P450 71B11-RELATED 3 361 - -
Spst4g03152 364 PRINTS E-class P450 group I signature 259 283 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03152 364 PRINTS E-class P450 group I signature 218 236 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03152 364 PRINTS E-class P450 group I signature 305 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03152 364 PRINTS E-class P450 group I signature 295 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03152 364 SUPERFAMILY Cytochrome P450 5 359 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03152 364 Gene3D Cytochrome P450 1 357 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03152 364 Pfam Cytochrome P450 184 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03152 Spst-Chr4 71097512 71099284 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g03152 3 361 Cytochrome P450 AT3G48310 43.223 2.89e-110 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03152 - - gmx:100810137 484.567