Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03149 ATGGGAAACCTACCCCAACTTGGCACACTCATACACCGCTCTCTTCATTCATTTGCTCAAACCTATGGCCCTATAATGTTGCTTCACTTTGGGAAGGTGCCAGTTCTTGTGATCTCAACGGCTGAGGCTGCTGGCGAGGTTATGAAAACCCATGACCTTGTTTTCTCCAATAGACCACATCGTAAGATGTCTGATATACTCTTGTATGATTCCAAAGATGTGGCATCTGCTCCATATGGAAACTACTGGCGGCAGATGAGGAGTATTTGTCTCTTGCATCTTCTCAGTGCAAAAAAGGTTCAATCCTTTGGTGCAGTGAGAGAAGAGGAAATCTCCATAATGATGGAAGAGATTAAGCAGTGTTGTTCTTCTTTGATGCCTGTGAATTTAACTGATTTATTTTCTAAAGTCACAAATAATATAGTGTGTAGAGCTGCTCTCGGAAGGAGATACAGCGGAGAAGGAGGGACTAAGCTTCGGGGGCCATTGAATGAGATGATGGAGCTGCTGGGTACTTCAGTTGTAGGGGACTACATACCTTGGCTTGATTGGTTGGGAACAGTTAATGGAATGTACGGTAGGGCAAAGAGAGTGGCTAAACAGTTTGATGAATTTTTGGATGAAGTTGTTGATGAGCATGTTAGTAAAAGAGGGCATGACGGTGATAGTGATGTTGATGATGAACAGAATGATTTGCTGAACGTTATGTTGAGGATCCAAAAGACATACGCCATGGGGTTTCAGATTGATAGAACAAACATAAAGGCATTGATCCTGGATATGTTTGTTGCGGGTACTGACACCAGCTTCTCAATCCTAAACTGGATAATGACAGAGCTCTTAAGGCACCCAACTGTGATGCAGAAGCTACAAGGTGAGGTAAGGAGTTTGGTTAGTGGCAGAACTTGCATTACTGAGGAAGATTTAAGCAGCATGCATTACTTGAAGGCAGTGATCAAAGAAGCTTTTCGATTACATCCCCCAGCTCCTTTGTTGCTTCCAAGGGAATCCATCGAAGATGTGAAAGTGATGGGTTATAACATTGCAAAGGGCACACAAGTAATAGTGAATGCTTGGGCAATTGGAAGAGATGGTTCTTATTGGGAGCAACCTCTGGAGTTCAAACCAGAGAGATTCTTAAATAGTTCAATAGATGTGAGAGGACATGATTTTGAACTGATACCATTTGGAGCAGGAAGGAGGGGCTGTCCAGGATTAACGTTTGCCATGAATGAGGTTGAGTTGGTCCTAGCAAACCTTGTTCACAAATTTAATTGGGAAGTGCCTAATGGTATAATGAGGGATCAGACACTGGACATGACTGAAACTGAAGGGAAAATGTCACAAG 1348 0.4288 MGNLPQLGTLIHRSLHSFAQTYGPIMLLHFGKVPVLVISTAEAAGEVMKTHDLVFSNRPHRKMSDILLYDSKDVASAPYGNYWRQMRSICLLHLLSAKKVQSFGAVREEEISIMMEEIKQCCSSLMPVNLTDLFSKVTNNIVCRAALGRRYSGEGGTKLRGPLNEMMELLGTSVVGDYIPWLDWLGTVNGMYGRAKRVAKQFDEFLDEVVDEHVSKRGHDGDSDVDDEQNDLLNVMLRIQKTYAMGFQIDRTNIKALILDMFVAGTDTSFSILNWIMTELLRHPTVMQKLQGEVRSLVSGRTCITEEDLSSMHYLKAVIKEAFRLHPPAPLLLPRESIEDVKVMGYNIAKGTQVIVNAWAIGRDGSYWEQPLEFKPERFLNSSIDVRGHDFELIPFGAGRRGCPGLTFAMNEVELVLANLVHKFNWEVPNGIMRDQTLDMTETEGKMSQ 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03149 449 FunFam Cytochrome P450 83B1 1 449 - -
Spst4g03149 449 SUPERFAMILY Cytochrome P450 2 438 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03149 449 PANTHER CYTOCHROME P450 71B11-RELATED 1 445 - -
Spst4g03149 449 CDD CYP71-like 21 445 - -
Spst4g03149 449 Pfam Cytochrome P450 1 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03149 449 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 396 405 IPR017972 GO:0005506|GO:0016705
Spst4g03149 449 Gene3D Cytochrome P450 1 448 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03149 449 PRINTS E-class P450 group I signature 273 299 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03149 449 PRINTS E-class P450 group I signature 19 38 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03149 449 PRINTS E-class P450 group I signature 393 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03149 449 PRINTS E-class P450 group I signature 316 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03149 449 PRINTS E-class P450 group I signature 43 64 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03149 449 PRINTS E-class P450 group I signature 253 270 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03149 449 PRINTS E-class P450 group I signature 357 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03149 449 PRINTS E-class P450 group I signature 403 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03149 449 PRINTS E-class P450 group I signature 137 155 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03149 449 PRINTS P450 superfamily signature 394 403 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03149 449 PRINTS P450 superfamily signature 403 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03149 449 PRINTS P450 superfamily signature 264 281 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03149 449 PRINTS P450 superfamily signature 317 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03149 Spst-Chr4 71058947 71062786 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g03149 1 445 Cytochrome P450 AT3G48310 50.000 3.20e-165 473