Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03148 ATGAAACTGAGAATTGAAGGGTATTTGTTTCAGGATATGTTTGCCGGGGGTACTGACACTAGCTTCACAGTCCTAAGCTGGATAATGACAGAGCTCTTAAGGCACCCAACTGTGATGCAGAAGCTACAAGGTGAGATAAGGAATGTGGTTAGTGGCAGAACTCGCGTGACTGAGGAAGATTTAAGCAGCATGCATTACTTGAAGGCAGTGATCAAAGAAACTTTTAGATTACACCCCCCTGGACCCTTGTTGATTCCAAGGGAATCCAGGGAAGATGTGAAAGTGATGGGTTATTACGTTGCAAAGGGCACAAAATTAGTTGTTAATGTTTGGGCAATTGGACGAGATCCTTCTTATTGGGAGCAACCTCTGGAGTTCAAACCAGAGAGATTCTTAAATAGTTCAATAGATGTGAGAGGACATGATTTTGAACTGATACCATTTGGAGCAGGAAGGAGGGGCTGTCCAGGAATAACGTTTGCCATGATTGAGATTGAGCTGGTCCTAGCAAACCTTCTACACCAATTTGATTGGGAAGTGCCTAGTGGAGTAATGGGGGATCAGACACTGAACATCACTGAAATTTTTGGGTTGTCCACGCATAGAAAATACCCTCTCATGACAATTGCATCCCATCGTGCATAA 645 0.4357 MKLRIEGYLFQDMFAGGTDTSFTVLSWIMTELLRHPTVMQKLQGEIRNVVSGRTRVTEEDLSSMHYLKAVIKETFRLHPPGPLLIPRESREDVKVMGYYVAKGTKLVVNVWAIGRDPSYWEQPLEFKPERFLNSSIDVRGHDFELIPFGAGRRGCPGITFAMIEIELVLANLLHQFDWEVPSGVMGDQTLNITEIFGLSTHRKYPLMTIASHRA 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03148 214 PRINTS E-class P450 group I signature 5 22 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03148 214 PRINTS E-class P450 group I signature 68 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03148 214 PRINTS E-class P450 group I signature 25 51 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03148 214 PRINTS E-class P450 group I signature 109 133 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03148 214 PRINTS E-class P450 group I signature 145 155 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03148 214 PRINTS E-class P450 group I signature 155 178 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03148 214 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 148 157 IPR017972 GO:0005506|GO:0016705
Spst4g03148 214 Gene3D Cytochrome P450 2 203 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03148 214 PRINTS P450 superfamily signature 146 155 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03148 214 PRINTS P450 superfamily signature 69 80 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03148 214 PRINTS P450 superfamily signature 16 33 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03148 214 PRINTS P450 superfamily signature 155 166 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03148 214 PANTHER CYTOCHROME P450 71B11-RELATED 9 211 - -
Spst4g03148 214 Pfam Cytochrome P450 12 191 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03148 214 FunFam Predicted protein 14 208 - -
Spst4g03148 214 SUPERFAMILY Cytochrome P450 10 213 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03148 Spst-Chr4 70994524 70995168 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g03148 12 211 Cytochrome P450 AT3G48280 53.234 5.55e-77 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03148 - - gmx:100780543 317.005