Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03137 ATGGGCTTTCTCCGGCGACTCTTCGGCGCCAAGAAACACCCCAACCCGCCACCCTCCGACGGGTCGGCTCCCAAACCCGCCAAAGACAAGAAATCCTGGAACTTCGTCAAGCACAGTACGAGGTACAAGTCCACCACGTTGTCCTCACTTAACAACAACTTTGACTCTTCAACATCTTCTGCTCCTTTCTCCAACTCCTTGGACGCCAACAAGCATGCCATCGCCGTCGCCGCCGCCACCGCTGCCGTCGCCGAGGCCGCTCTCGCCGCCGCCCACGCCGCAGCCGAGGTCGTCAGACTGACCAGCGCAACTGGGCCTGCCTCCGGCAGACCCGCCACAGGGGCGCATTCTCGGAGGCTGGCAGAGGATACCGCCGCCGCCGTGAAGATTCAGTCGGCGTTCCGAGGTTACTTGGCAAGGAGGGCTTTGAGAGCACTTAAGGCATTGGTGAAGTTGCAAGCGTTGGTGAGAGGCCACATTGTGAGAAAGCAAACTACAGATATGCTAAGACGCATGCAGACTTTGGTGCGACTGCAGTCCCGGGCACGTGCTACACGTGGGAACTTGTCAGATAATATGCATTCTTTCAAGTCTTCACTTTCTCATTACCCTGTCCCTGAAGATTATCAGCACTCACTTTGTGCCTATAGTACAAAATTTGATGGATCTGTTCTCAAGAGATGTAGTTCCAATGCAAATTTTAGGGACGTTGACCTGGAGAAAACCCGGTTTGGTTCCCATTGGTTAGACAATTGGATGGAAGAAAATTCTTGGAGCCAAACTAGAGATGGTTCATTGAAAAATGGGCACCTTGATGATGAGAAGAGTGACAAGATTCTAGAAGTGGATACTTGGAAGCCACACTTGAACTCACACCATAGTAGTGGCAGCTCATTTCAGCCAGCACATCATTATTTGTCTTCTGATTATTACAATGAGAATTTTGTGGCACATGAGTCTCCATCAAAACATTCTTCAAAAACTCTATATCCAAGTCTCTCTTCAAGGGAGTTTCAACCCCTTGGCTCTCTTAAACTTCACAAGGGAAAAGAAGAAGCACCTTTGAGAAATGTTGAGGATAGTCCTCAAGCATTTTCTGCTTCCTCTAGACATGGAAGTGGTGCAAGGAGAGGTCCATTCACGCCAACTAAGAGTGAGTGTGCATGGAGTGTCTTCAGTGGCTATTCTGGTCATCCTAATTACATGTCAAACACTGAATCTTCAAGAGCCAAGGTTAGGTCACATAGTGCACCAAGGCAAAGAATGGAGTTTGAGAGATATGGTTCCACAAGAAGGTCTCTTCAGGGTTTTTGGGATGCAGGACCTAGTTCAGATAGGGATTCTGATTTTAGGAGCAAGGCCTACCCTACCACAAACAGCAGCTTGAACAGAATTGGGAGTGCCAATTTAAGGTGA 1416 0.4908 MGFLRRLFGAKKHPNPPPSDGSAPKPAKDKKSWNFVKHSTRYKSTTLSSLNNNFDSSTSSAPFSNSLDANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSATGPASGRPATGAHSRRLAEDTAAAVKIQSAFRGYLARRALRALKALVKLQALVRGHIVRKQTTDMLRRMQTLVRLQSRARATRGNLSDNMHSFKSSLSHYPVPEDYQHSLCAYSTKFDGSVLKRCSSNANFRDVDLEKTRFGSHWLDNWMEENSWSQTRDGSLKNGHLDDEKSDKILEVDTWKPHLNSHHSSGSSFQPAHHYLSSDYYNENFVAHESPSKHSSKTLYPSLSSREFQPLGSLKLHKGKEEAPLRNVEDSPQAFSASSRHGSGARRGPFTPTKSECAWSVFSGYSGHPNYMSNTESSRAKVRSHSAPRQRMEFERYGSTRRSLQGFWDAGPSSDRDSDFRSKAYPTTNSSLNRIGSANLR 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03137 471 Pfam IQ calmodulin-binding motif 124 144 IPR000048 GO:0005515
Spst4g03137 471 Pfam IQ calmodulin-binding motif 147 164 IPR000048 GO:0005515
Spst4g03137 471 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 118 168 IPR027417 -
Spst4g03137 471 ProSiteProfiles IQ motif profile. 147 174 IPR000048 GO:0005515
Spst4g03137 471 MobiDBLite consensus disorder prediction 347 382 - -
Spst4g03137 471 Pfam Protein of unknown function (DUF4005) 361 433 IPR025064 -
Spst4g03137 471 ProSiteProfiles IQ motif profile. 123 151 IPR000048 GO:0005515
Spst4g03137 471 MobiDBLite consensus disorder prediction 1 32 - -
Spst4g03137 471 SMART iq_5 122 144 IPR000048 GO:0005515
Spst4g03137 471 SMART iq_5 145 166 IPR000048 GO:0005515
Spst4g03137 471 MobiDBLite consensus disorder prediction 434 471 - -
Spst4g03137 471 Gene3D - 122 176 - -
Spst4g03137 471 MobiDBLite consensus disorder prediction 453 471 - -
Spst4g03137 471 PANTHER IQ-DOMAIN 5-RELATED 34 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03137 Spst-Chr4 70799608 70804146 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g03137 1 436 IQD Protein Family AT5G62070 46.120 8.54e-62 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03137 - - pvu:PHAVU_004G120200g 793.497