Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03134 ATGCACATGGAAAAAGATGGAGTTACAAAATCCAGTAGTGATCATAATCTTCAAGCAGAAGCTAATGACGTATTTTCTCAGTGGAACCTTCTTCTTGTGGTTCTTCATTTCCATGTTGCATTCTTCATCTTACTAGCCTTTCCCACAATATTCAATCTTCTATCCAAACTGAATTCCAATTCACACAAAAAATCACCACCATCTCCTCCAAAGCGTCCAATAATAGGAAATCTCCACCAACTTGGCACCCTCACTCACCACACTCTCCAATCCTTTGCTCAAACATATGGCCCTTTAATGTTGCTTCACTTCGGGAAGGTTTCAGTTCTTGTGGTCTCAAATACTGAAGCAGCACGTGAGGTTTTGAAAACCCAAGACCACATTTTCTGCAACAGACCATATCGTAAGATGTTTGATATCTTCTGGTATGGTTCCAGAGATGTAGCATCTGCTCCATATGGTCACTACTGGAGGCAGGTGAAGAGTATATGTGTGTTGCATCTTCTCAGTGCCAAAAAGGTTCAGTGCTTTCGTAAAGTGAGGGAAGAGGAAGTTGTAGTAATGATAGAGAAAGTTATGGAGAGTTGTTCTTCTTTGGTGCCAGTGAACTTGACTGACTTGTTCTCTGATGTGACAAATGATATAGTGTGTAGGAGTGTTATTGGAAGGAGATATGAAGGGAGTGAGCTTAGGGGCCCAATGAGCCAGTTGGAAGAGTTGTTGGGGGCTTCAGTTATAGGGGACTATATACCTTGGCTTGATTGGTTAGGAAGGGTTAATGGAATGTATGGTAGAGCAGAGAGAGTGGCTAAAAGGCTTGATGAATTTTTGGATGAGGTTGTCGATGAGCATGTTAGTATGAGAAGCCATGATGGGCATGGTGATGATGTTGATGGTGAAAGGCAGAATGATTTTGTGGACATCTTGCTGGGGATTCAGAGAACAAGCTCCACCACAGATTTTCAGATTGATAGGACTATCATGAAGGCTTTGATCATGGATATGTTTGGTGCAGGAACTGATACTACCCTTGCAGTCCTAGAATGGGCTATGACAGAACTCTTGAGGCACCCCAATGTGATGCAGAAACTACAAGTTGAGGTGAGAAGCATGGCTAGGGACAAGACTCACATAACTGAGGAGGATTTGAGTGGCATGTCTTATTTAAAAGCAGTGATTAAAGAAATTCTTAGATTACATCCTCCATCTCCCATATTGATTCCAAGGGAATCCATGCAAGACACCAAAGTGATGGGCTATGACATTGCAATTGGCACACAAGTACTAGTCAATGCTTGGGCAATTTCCACAGACCCTTCGTATTGGGATAAACCTCTGGAGTTTCAACCAGAAAGATTCTTGAGGAGTTGGATGGATATCAAAGGACATGATTTGGAACTGGTTCCATTTGGAGCAGGAAGAAGGGGTTGTCCAGGAATAGCTTTTGCCATGGTTGTGAATGAGTTGGTGCTTGCAAACATTGTGCACCAATTTGATTGGACTGTGCCTGGTGGAGTGGTGGGGGAACAAACACTTTGTATGTCTGAAACTACTGGATTAACTGTTCATAGAAAATTACCCCTTGTGGCTCTTGCATCACCTTATATGTAA 1611 0.4246 MHMEKDGVTKSSSDHNLQAEANDVFSQWNLLLVVLHFHVAFFILLAFPTIFNLLSKLNSNSHKKSPPSPPKRPIIGNLHQLGTLTHHTLQSFAQTYGPLMLLHFGKVSVLVVSNTEAAREVLKTQDHIFCNRPYRKMFDIFWYGSRDVASAPYGHYWRQVKSICVLHLLSAKKVQCFRKVREEEVVVMIEKVMESCSSLVPVNLTDLFSDVTNDIVCRSVIGRRYEGSELRGPMSQLEELLGASVIGDYIPWLDWLGRVNGMYGRAERVAKRLDEFLDEVVDEHVSMRSHDGHGDDVDGERQNDFVDILLGIQRTSSTTDFQIDRTIMKALIMDMFGAGTDTTLAVLEWAMTELLRHPNVMQKLQVEVRSMARDKTHITEEDLSGMSYLKAVIKEILRLHPPSPILIPRESMQDTKVMGYDIAIGTQVLVNAWAISTDPSYWDKPLEFQPERFLRSWMDIKGHDLELVPFGAGRRGCPGIAFAMVVNELVLANIVHQFDWTVPGGVVGEQTLCMSETTGLTVHRKLPLVALASPYM 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03134 536 PRINTS E-class P450 group I signature 347 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03134 536 PRINTS E-class P450 group I signature 93 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03134 536 PRINTS E-class P450 group I signature 211 229 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03134 536 PRINTS E-class P450 group I signature 327 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03134 536 PRINTS E-class P450 group I signature 117 138 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03134 536 PRINTS E-class P450 group I signature 390 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03134 536 PRINTS E-class P450 group I signature 467 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03134 536 PRINTS E-class P450 group I signature 431 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03134 536 PRINTS E-class P450 group I signature 477 500 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03134 536 CDD CYP71-like 95 528 - -
Spst4g03134 536 FunFam Cytochrome P450 83B1 53 531 - -
Spst4g03134 536 PANTHER CYTOCHROME P450 71B11-RELATED 45 532 - -
Spst4g03134 536 Gene3D Cytochrome P450 53 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03134 536 Pfam Cytochrome P450 66 513 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03134 536 SUPERFAMILY Cytochrome P450 66 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03134 536 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 470 479 IPR017972 GO:0005506|GO:0016705
Spst4g03134 536 PRINTS P450 superfamily signature 391 402 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03134 536 PRINTS P450 superfamily signature 338 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03134 536 PRINTS P450 superfamily signature 468 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03134 Spst-Chr4 70764461 70767665 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g03134 56 533 Cytochrome P450 AT3G48270 49.375 8.88e-170 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03134 - - gmx:100813357 799.66