Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03126 ATGCCCCCCATGACACCTTCACGGGTGGCAGGAGGGTTAACTCAATCATCATCACATTCTGGAGTTTTCTTTCAAGCAGATGGGCAGTCACAGAGTGTATTTAACTCTCACTTAAGCTCATCTTTCGTTAACTCGTCTAGCACGGTACCAGGGGCTGGGCGTTCAAACCTGGGTCCGGTTTCTGGGGATATGAATAATGCAGTTCTGAACAGTGTGGCAAACTCAGCACCAAGTGTTGGAGCTAGTTCTTTAGTCACAGATGCAAATTCCGCTCTCTCTGGTGGCCCCCATTTGCAGAGAAGTGCCAGTGTTAACACAGACTCATACTTACGATTACCTGCCTCGCCTATGTCATTCACGTCAAATAATATTAGTATTTCTGGCTCATCGGTGATGGATGGTTCCTCTGTAGGACAGCAGAGCTCTCATCAAGATCAGAATGTTCAACAATTGCAGCAGAATCAGCAGCAGCAGCAGCTGCAGGGTGCTTCAAGTGCTACTTCATTGTCTGCATCTCAAAGTGGCCCATCTTCCCTGCATATGGGTGCACATGTCCCAGGATCTTTCATTCATGATCCGAATAATGTGTCTCAGCTGTCAAAGAAACCTAGACTGGATATCAAACAGGAAGATATAATGCAGCAGCAGCAGCAGGTTATACAACAGATTCTTCAGAGACAAGATTCCATGCAATTCCAGGGGCGTAGTCCACAGGTACAGGCTTTACTTCAACAACAGCAGAGACTTAGACAACAACAAATCTTTCAGTCAATGCCCCAATTACAGAGAGTGCACTTGCAACAGCAACAACAACAACAACAATTGCAAATGAGGCAGCAATTACAGCAACAAGCATTGCAGCCCTCTTCTGCTGTCAAGCGCCCATATGACAATAGTGTTAGTGGGGTCTGTGCTCGTCGTCTGATGCAGTACCTCTACCATCAAAGGCAACGACCAAATGATAATATTATTGCCTATTGGAGAAAATTTGTGGCTGAATACTACTCTCCCCGTGCAAAAAAACGGTGGTGCTTGTCATTATATAACAATGTTGGGCATCATGCACTTGGTGTTTTCCCCCCAGCTGCAATGGATGCATGGCAATGTGACATATGTGGTTCTAAATCTGGAAGGGGATTTGAGGCAACTTATGAAGTATTACCTAGACTTAATGAAATCAAATTTGGAAGTGGAGTGATTGATGAACTTTTGTTTCTGGACTTGCCACGTGAAACAAGATATCCTTCTGGTGCGATGATGTTAGAATATGCAAAAGCAGTTCAAGAGAGTGTATATGAGCAGCTTCGTGTTGTTCGTGAGGGTCAACTCCGCATCATATTCACTCAAGATTTGAAGATATTATCTTGGGAGTTCTGTGCAAGGCGGCATGAAGAACTGATCCCTCGGAGGTTAGTTGCACCACAGGTCAACCAATTAGTTCATGTAGCTCAAAAATGCCAGAGTACAATTGCTGAAAGTGGGGCAGATGGGGTTTCTCAGCAAGATTTGCAAACAAACAGCAACATGGTATTGACAGCAGGGCGGCAGCTTGCGAAAATTTTAGAGTTGCAATCGCTTAATGACTTGGGTTTTTCTAAAAGATACGTGAGATGTTTGCAGATTTCGGAGGTTGTCAACAGCATGAAAGACCTGATAGATATCTGTTCAGAGCACAAAATTGGGGCAATTGAGAGTTTGAAAAACTATCCTCGACTAACAACAGCCTCAAAGCTCCAGATGCAAAAGATGCAGGAAATGGAACAGATGGCAAATGTCCAAGGTCTGCCAACTGATAGAAACACACTCAATAAGCTTATGGCAATGAATCCTGGATTGAACAACCACATAAACAACACTCATAATATGGTTAATCGTGGTGCTTTGAGTGGGTCAGCCCAAGCTGCTTTAGCATTGACCAACTACCAAAGTCTTCTCATGAGGCAAAATTCAATGAATTCTAGCCCTGGCTCCCTCCAGCGAGAAGGATCCTCATACAATAATTCTAACCCAAGTCCCTCTTCAGCTTTACAAGGAGCTGGTCCTTCTTTAATTCCAGGCTCAATGCAAAACTCGCCCGTAGGTGGTTTCCCAAGTTCCCATCTTCCCCCACAGCAGCAGCAGCAACAACTTCTTCAACAGCGCACATTAAGTGCAAATGGTTTACTGCAACAAAATCATTCACATGGGTCCCAAGGAAATCAAGCTCTACAGCAGCAGCAGATGATCCAGCAACTGGTGCAGGAAATGTCAAATAACAATGGGGGAATGCAACCGCAGTCTCTTGGTGGACCCAATGCAAATGGGAATATGGCAAAAAATGCATTGGGTTTTGGGGGTCATAATACTCCATCCTTAAGCGGAGGTTCTGTCAATGTTCCAGGAAACAATGGACCCATTTCAAGGAATAATAGCTTCAAAACAGTTTCAACCAGTGATTGTTCTGCAGCTGGAGGCAACAATGGATTCAACCCAAGAACATCTGATATGCCGCAAAGTCTACATTTGCAAGGTGTGATTCAGGATATCGGCCATGAGTTTGCGGATAACCCTTTCTTTAACAGTGATCTTGATGATAACTTGGGTTTTGGGTGGAAGGGATGA 2601 0.4437 MPPMTPSRVAGGLTQSSSHSGVFFQADGQSQSVFNSHLSSSFVNSSSTVPGAGRSNLGPVSGDMNNAVLNSVANSAPSVGASSLVTDANSALSGGPHLQRSASVNTDSYLRLPASPMSFTSNNISISGSSVMDGSSVGQQSSHQDQNVQQLQQNQQQQQLQGASSATSLSASQSGPSSLHMGAHVPGSFIHDPNNVSQLSKKPRLDIKQEDIMQQQQQVIQQILQRQDSMQFQGRSPQVQALLQQQQRLRQQQIFQSMPQLQRVHLQQQQQQQQLQMRQQLQQQALQPSSAVKRPYDNSVSGVCARRLMQYLYHQRQRPNDNIIAYWRKFVAEYYSPRAKKRWCLSLYNNVGHHALGVFPPAAMDAWQCDICGSKSGRGFEATYEVLPRLNEIKFGSGVIDELLFLDLPRETRYPSGAMMLEYAKAVQESVYEQLRVVREGQLRIIFTQDLKILSWEFCARRHEELIPRRLVAPQVNQLVHVAQKCQSTIAESGADGVSQQDLQTNSNMVLTAGRQLAKILELQSLNDLGFSKRYVRCLQISEVVNSMKDLIDICSEHKIGAIESLKNYPRLTTASKLQMQKMQEMEQMANVQGLPTDRNTLNKLMAMNPGLNNHINNTHNMVNRGALSGSAQAALALTNYQSLLMRQNSMNSSPGSLQREGSSYNNSNPSPSSALQGAGPSLIPGSMQNSPVGGFPSSHLPPQQQQQQLLQQRTLSANGLLQQNHSHGSQGNQALQQQQMIQQLVQEMSNNNGGMQPQSLGGPNANGNMAKNALGFGGHNTPSLSGGSVNVPGNNGPISRNNSFKTVSTSDCSAAGGNNGFNPRTSDMPQSLHLQGVIQDIGHEFADNPFFNSDLDDNLGFGWKG 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03126 866 Pfam LIM-domain binding protein 307 567 IPR029005 -
Spst4g03126 866 PANTHER LIM DOMAIN-BINDING PROTEIN 45 852 IPR029005 -
Spst4g03126 866 MobiDBLite consensus disorder prediction 130 179 - -
Spst4g03126 866 MobiDBLite consensus disorder prediction 130 198 - -
Spst4g03126 866 MobiDBLite consensus disorder prediction 649 711 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03126 Spst-Chr4 70647198 70652319 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g03126 302 576 C2H2 Transcription Factor Family AT1G43850 60.727 3.96e-109 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03126 - - gmx:100816886 1294.26