Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03125 ATGCATCTTGAAGCGGCTGCGGATCTATCACCGACTAATCACCACATTCACTTTCGCGACGCGTGTCTGAATCGTAACCTGCCACTGCAGGTGAAAGATAGCGCCTTCCGTTCGCTTTCTCCCCCCACCCCTCGCGGTTTCGCTGTGAGTAGTTCTAAAGAATTCGTCTTGGCACTGAACTGTTTTGAAAGCTTCATTGGGGGCTTGGCTCTGGAGAGCTACATAGACTTCAGTCACCAGGAGGGGTTGCCTCCCATGACACCTTCGCGGGTGACAGGAGGGTTAACCCAATCATCATCACATTCTGGAATTTTCTTTCAAGGAGATGGGCAGTCACAGAGTCTAGTTAACACTCACTTAAGCTCATCTATTGTTAACTCGTGTAACACAGTTCCGGGAGCTGGTCGATCAAACCTGGGTCCAGTTTCTGGGGATATAAATAATGCTGTTTTGAACAGTGTGGCAAACTCAGCACCAAGTGTTGGAGCTAGTTCTTTAGTCACAGATGCAAATTCTGCCCTCTCTGGTGGCCCCCATTTACAGAGAAGTGCCAGTGTTAACACGGACTCATACTTACGTTTACCTGCCTCACCCATGTCATTTACATCAAATAATATTAGTATTTCTGGCTCATCGGGGATTGATGGTTCTTCTGTAGTGCAACAGAGCTCTCATCAAGATCAGAATGCTCAACAATTGCAGCAGAATCAGCAGCAGCTGCGGGGTGCTTCAAGTGCTACATCGTTGCCTGCATCACAAACTGGCCCATCGTCGCTCAATATGGGTGCACAAGTCCCAGGATCTTTCATTCATGATCCAAATAATGTGTCACAACTGTCAAAGAAACCGAGACTGGATATCAAACAGGAAGATATAATGCAGCAGCAGGTTCTACAACATATTCTTCAGAGACAAGATTCCATGCAACTGCAGGGTCGTAATCCACAGTTACAGGCTTTACATCAACAACAGCAGAGACTGAGACAACAGCAAATCTTCCAGTCAATGCCGCCCCAATTACATCGAGTGCACTTGCAGCAGCAGCAACAACATCAACAACAAATGCAATTGAGGCAGCAATTACAGCAACAAGTGATGCAGCCCTCTTCTGCTATCAAGCGCCCATGTGACAATGGTGTTAGTGGGGTTTGTGCTCGTCGATTGATGCAGTATCTCTATCATCAAAGGCAGCGGCCAAATGATAATATTATTGCCTATTGGAGAAAATTTGTGGCTGAATATTACTCTCCTCGTGCAAAGAAACGGTGGTGCTTGTCATTATATAACAATGTTGGGCATCACGCACTTGGTGTTTTCCCCCAAGCAGCTACGGATGCATGGCAGTGTGACATATGTGGTTGTAAATCTGGAAGGGGATTTGAGGCAACTTATGAAGTATTACCTAGACTTAATGAAATTAAATTTGGTGGTGGAGTGATTGATGAACTTTTGTTTCTGGACTTGCCACGTGAAAAACGATTTCCTTCTGGTGCGATGATGTTAGAATATGCAAAAGCAGTTCAAGAGAGTGTATATGAGCAGCTTCGTGTTGTTCGTGAAGGTCAACTTCGCATCATATTTAGTCAAGACTTGAAGATATTATCATGGGAGTTCTGTGCAAGGCGGCATGAAGAGCTTCTTCCTCGAAGGTTGGTTGCACCACAGGTCAGCCAATTAGTACAGGTAGCTCAAAAATGCCAGAGTACAATTGCTGAAAGTGGAGCAGATGGGGTTTCTCAGCAAGATTTGCAAACAAACAGCAACATGGTATTGACAGCTGGGCGCCAGCTTGCAAAAATTTTGGAGTTGCAATCGCTTAATGACTTGGGTTTTTCTAAAAGATACGTGAGATGTTTGCAGATTTCGGAGGTTGTCAACAGCATGAAAGACCTAATAGATATCTGTGCAGAGCACAAAATTGGGGCAATTGAGAGTTTGAAAAATTATCCTCGACTAGCAACAGCCTCGAAGCTCCAGATGCAAAAGATGCAGGAAATGGAACAAATGGCAAATGTTCATGGTCTGCCAACTGATAGAAACACACTCAATAAGCTGATGGCAATGAATCCTGGATTGAGTACCCACATAAACAACACTCAGAATATGGTTAATCGTGGTGCTTTGAGTGGGTCAGCCCAAGCCGCTTTGGCGCTGACCAACTATCAAAATCTTCTCATGAGGCAAAATTCAATGAATTCTAGCCCTGGTTCCTCATTCAATAATTCTAACCCTAGTCCCCCTTCTGCTTTGCATGGGGCTGGTCCTTCTTTAATTCCAGGCTCAATGCAAAACTCGCCTGTAGGTGGTTTCCCTGGTCCCCATCTACCCCCACAGCAGCACCAGCAGCAGCAACAACTCCTCCTTCATCAGCGCACATTAAGTGCAAATGGTTTAGTGCAACAAAATCATTCACTGGGGTCCCAAGGAAATCAAGCTCTGCAGCAGCAGCAGCAGCAGATGATCCATCAACTGGTGCAGGAAATGTCAAATAACAATGGGGGAATGCAATCACAGTCTCTTGGTGTACCCAATGCAAATGGGAATATGGCAAAGAATGCGTTGGGTTATGGGGGCCAAACTCCATCCTTAAGTGGAGGTTCTGCTAATGTTCCACGAAACAATGGACCCATTTCAAGAAATAATAGCTTCAAAACAGCTTCAAACAGTGATTCTTCTGCAGCTTGTGGCAATAATGGATTCAACCCAAGAACATCTGATATGCCACATGGTCTACATTTGCAAGATGTGGTTCAGGATATTGGCCATGATTTCGCGGATAACCCCTTCTTTAACAGTGATCTCGATGATGACATGGGTTTTGGCTGGAAGGCATGA 2835 0.4511 MHLEAAADLSPTNHHIHFRDACLNRNLPLQVKDSAFRSLSPPTPRGFAVSSSKEFVLALNCFESFIGGLALESYIDFSHQEGLPPMTPSRVTGGLTQSSSHSGIFFQGDGQSQSLVNTHLSSSIVNSCNTVPGAGRSNLGPVSGDINNAVLNSVANSAPSVGASSLVTDANSALSGGPHLQRSASVNTDSYLRLPASPMSFTSNNISISGSSGIDGSSVVQQSSHQDQNAQQLQQNQQQLRGASSATSLPASQTGPSSLNMGAQVPGSFIHDPNNVSQLSKKPRLDIKQEDIMQQQVLQHILQRQDSMQLQGRNPQLQALHQQQQRLRQQQIFQSMPPQLHRVHLQQQQQHQQQMQLRQQLQQQVMQPSSAIKRPCDNGVSGVCARRLMQYLYHQRQRPNDNIIAYWRKFVAEYYSPRAKKRWCLSLYNNVGHHALGVFPQAATDAWQCDICGCKSGRGFEATYEVLPRLNEIKFGGGVIDELLFLDLPREKRFPSGAMMLEYAKAVQESVYEQLRVVREGQLRIIFSQDLKILSWEFCARRHEELLPRRLVAPQVSQLVQVAQKCQSTIAESGADGVSQQDLQTNSNMVLTAGRQLAKILELQSLNDLGFSKRYVRCLQISEVVNSMKDLIDICAEHKIGAIESLKNYPRLATASKLQMQKMQEMEQMANVHGLPTDRNTLNKLMAMNPGLSTHINNTQNMVNRGALSGSAQAALALTNYQNLLMRQNSMNSSPGSSFNNSNPSPPSALHGAGPSLIPGSMQNSPVGGFPGPHLPPQQHQQQQQLLLHQRTLSANGLVQQNHSLGSQGNQALQQQQQQMIHQLVQEMSNNNGGMQSQSLGVPNANGNMAKNALGYGGQTPSLSGGSANVPRNNGPISRNNSFKTASNSDSSAACGNNGFNPRTSDMPHGLHLQDVVQDIGHDFADNPFFNSDLDDDMGFGWKA 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03125 944 MobiDBLite consensus disorder prediction 883 907 - -
Spst4g03125 944 Pfam LIM-domain binding protein 387 647 IPR029005 -
Spst4g03125 944 MobiDBLite consensus disorder prediction 212 278 - -
Spst4g03125 944 PANTHER LIM DOMAIN-BINDING PROTEIN 129 930 IPR029005 -
Spst4g03125 944 MobiDBLite consensus disorder prediction 728 749 - -
Spst4g03125 944 MobiDBLite consensus disorder prediction 883 904 - -
Spst4g03125 944 MobiDBLite consensus disorder prediction 728 786 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03125 Spst-Chr4 70633282 70640178 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g03125 382 651 C2H2 Transcription Factor Family AT1G43850 61.481 5.74e-107 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03125 - - pvu:PHAVU_004G121400g 1298.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03125 4 70633282 70640178 Spst4g03125 4 70633282 70640178 ECH