Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03110 ATGGCTGTTGCCAAGAGCAACAGCAGTCATGAACCTTGTACAGCATACAATTGTTACAAAGTAGCAGGCTTGAGTGAGACCATATTAGACACAAGTCAAGTCTCTAATTTAAAAGATCGGTACGTCCTCGGCGAGCAATTGGGTTGGGGGCAGTTTGGTGTCATAAGGGCATGTTCTGACAAGTTAACAGGAGAGGTTTTGGCCTGCAAATCAATTGCTAAAGATAGGTTGGTTACTTCGGATGATTTAAGGAGTGTCAAACTTGAGATAGAGATAATGGCTAGGCTGTCTGGGCATCCCAATGTTGTGGATCTCAAAGCTGTTTATGAAGAGGAAGGTTTTGTTCACTTGGTGATGGAGCTATGTGCTGGAGGAGAGCTTTTTCACCGATTAGAGAAGCACGGATGGTTTTCAGAATCAGAAGCCAGGGTTCTCTTTAGGCACCTTATGCAGGTGGTTTTGTATTGTCATGAAAACGGGGTTGTTCATAGAGATTTGAAGCCCGAGAACATTCTCTTAGCAACAAGATCCTCTTCATCTCCTATTAAATTGGCAGATTTTGGACTAGCAACCTACATCAAGCCTGGTCAAAGTTTGCACGGTTTAGTTGGGAGTCCATTCTACATAGCCCCAGAGGTATTAGCTGGTGCATATAACCAGGCTGCTGATGTGTGGAGTGCAGGTGTAATTCTTTACATTCTGTTGAGTGGGACGCCTCCGTTTTGGGGGAAGACTAAATCACGGATTTTTGAGGCTGTCAAAGCTGCTTCCCTGAAGTTTCCATCGGAACCTTGGGATCGAATTTCTGAATCAGCTAAGGATTTGATCAGGGGAATGCTTTGCACAGACCCTTCTCGTAGACTCACTGCCCTAGAGGTTTTAGATCATTGTTGGATGGAAAGCAACCAAACAAATCCAGAACAACTACGTGAAAATCAAATCGAAAGTTGCCAAGAATGGGATGTTGGTGGCAGCTCATTCTCTGCTTCTTTCATGCCCAGGAATCAGGACATCAGCTTTGGCGCCACCGGCTCACCTACTTGTGATGCTCAATCACCTACTTTCACATGCAGATCGTCGTTTTCTTCTTTTCTGGAAGAATCAGTTTCACCATGTCTACTCTCTGGTGGCTTTTCATTCAAGAGTGTAGGTGATTCCTCTGGTTTGGAATTCTCTTCTCCCATTCCCTCGATGCTTAGCTTTTCATTCCTCAGCCCCTCTCCCGTTGTTGAACACAAGAGTTGTAAATTAGAGTGTCCAGCTAACATATCAGGTGTAAATGCAATTACTGGAGAATCTAACATGGGAAAGATACTTTTACTTCAAGATTCTCAACTTTGCATTGAACATAATATTAAAGAAACGAATCGCAAGACTGTAGACGCTAAAAGGTCAAGTGGAATGAATGGACACAAGGTACTGGGAATCCACAGTAAGAGAAACAGGACAATTGGACTTGGTGAGTGTGAGCAACTTGACCTTGTGGTGACTGAATCAGTCATCCGGTGGTCATCATGCACTCAAGTACCTACATCTTTGAGATCATCTCTTGTTTGCTAA 1560 0.4372 MAVAKSNSSHEPCTAYNCYKVAGLSETILDTSQVSNLKDRYVLGEQLGWGQFGVIRACSDKLTGEVLACKSIAKDRLVTSDDLRSVKLEIEIMARLSGHPNVVDLKAVYEEEGFVHLVMELCAGGELFHRLEKHGWFSESEARVLFRHLMQVVLYCHENGVVHRDLKPENILLATRSSSSPIKLADFGLATYIKPGQSLHGLVGSPFYIAPEVLAGAYNQAADVWSAGVILYILLSGTPPFWGKTKSRIFEAVKAASLKFPSEPWDRISESAKDLIRGMLCTDPSRRLTALEVLDHCWMESNQTNPEQLRENQIESCQEWDVGGSSFSASFMPRNQDISFGATGSPTCDAQSPTFTCRSSFSSFLEESVSPCLLSGGFSFKSVGDSSGLEFSSPIPSMLSFSFLSPSPVVEHKSCKLECPANISGVNAITGESNMGKILLLQDSQLCIEHNIKETNRKTVDAKRSSGMNGHKVLGIHSKRNRTIGLGECEQLDLVVTESVIRWSSCTQVPTSLRSSLVC 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03110 519 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Spst4g03110 519 FunFam Calcium-dependent protein kinase 1 43 126 - -
Spst4g03110 519 SUPERFAMILY Protein kinase-like (PK-like) 38 354 IPR011009 -
Spst4g03110 519 Pfam Protein kinase domain 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g03110 519 Gene3D Transferase(Phosphotransferase) domain 1 128 326 - -
Spst4g03110 519 Gene3D Phosphorylase Kinase; domain 1 42 127 - -
Spst4g03110 519 CDD STKc_CAMK 40 298 - -
Spst4g03110 519 SMART serkin_6 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g03110 519 FunFam Phosphoenolpyruvate carboxylase kinase 128 315 - -
Spst4g03110 519 PANTHER SERINE/THREONINE-PROTEIN KINASE 30 319 - -
Spst4g03110 519 ProSitePatterns Protein kinases ATP-binding region signature. 47 74 IPR017441 GO:0005524
Spst4g03110 519 ProSiteProfiles Protein kinase domain profile. 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03110 Spst-Chr4 70511910 70514073 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g03110 24 306 EF-hand Containing Proteins AT3G57530 49.117 7.73e-99 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Spst4g03110 Pkinase 2.3e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03110 - - gmx:100776088 906.36