Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03106 ATGGGTAAGGGAGGAATGTCAATTGATGATCATGGAGAAGACAAAGAAGAGAACATGGCCGCTTGGCTTGTTGGAATAAAAACTCTCAAGATTCAACCTTTCAAGCTTCGTACTTTAGGACCTTATGATGTCAGAGTCAGAATGAAGGCTGTTGGTATCTGTGGGAGTGATGTTCACCACTTCAAGTTTACTACAAGATCTGCTCAGTTAAAATATGATTGGGTTGAGTTGGTCCATTGTGTCCTCACCCAAACTAATGAACACCTTGGATATGAGTTTTTCCTGAGTTTCAAATTTGTTGTTTCATTCACTTTTCAGACTCTGAGGTGTGCAAACTTTATAGTCAAGGAACCAATGGTTATTGGTCATGAGTGTGCTGGGATCATAGAAGAAGTTGGAAGTCAGGTAAAGAGTTTGGTGCCGGGTGACCGTGTGGCCATTGAACCTGGGATCAGTTGTTCGAGATGCGGCCACTGCAAACAGGGTCGATATAATTTATGTGATGATATGAAGTTTTTTGGTAGTCCACCAGTTAATGGTTCCCTGGCGAATCAGGTTTGA 561 0.4207 MGKGGMSIDDHGEDKEENMAAWLVGIKTLKIQPFKLRTLGPYDVRVRMKAVGICGSDVHHFKFTTRSAQLKYDWVELVHCVLTQTNEHLGYEFFLSFKFVVSFTFQTLRCANFIVKEPMVIGHECAGIIEEVGSQVKSLVPGDRVAIEPGISCSRCGHCKQGRYNLCDDMKFFGSPPVNGSLANQV 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03106 186 SUPERFAMILY GroES-like 19 184 IPR011032 -
Spst4g03106 186 PANTHER SORBITOL DEHYDROGENASE 16 63 - -
Spst4g03106 186 Pfam Alcohol dehydrogenase GroES-like domain 43 186 IPR013154 -
Spst4g03106 186 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 122 136 IPR002328 GO:0008270|GO:0016491
Spst4g03106 186 Gene3D - 14 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03106 Spst-Chr4 70476731 70478023 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g03106 21 172 Monolignol Biosynthesis Gene Families AT4G39330 26.752 5.42e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03106 K00008 - gmx:100791559 248.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03106 4 70476731 70478023 Spst4g03106 4 70476731 70478023 ECH