Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03100 ATGGGTAGGGAGTGGTATTTTGCTGGAAGATCATCAAAGAGAGGTGTAGTAGTGGGAGGAGGAGGAGGAGGAGGTGAAGCTGAAGCACAAGAACCTTCTGGGTGCATGTGTGCTGTTTTTCAGTTATTTGATTTTCATCCCTTTCATTTTCCCAACATAAACCAACAACAAACCTCTTTCAAACCACCTTCATGCTCTTTAGAAGACCATACCAGAGTCTCCAAAGGTGCTGAAGCACCTAGGAACAGCTTGGAATCAGAGGATGGTGATGGTCATGTTTCATCTCTCTCATCAAAAGAAGAAGATTTTAAAATTCCTAAGAATATTGTACAAATTAAGACAAGTGGAGGCACAACAACAGGTGGTGGAAATTTGAATGACTTGCCTGCAGAAATCACCAGCTCACCAGGGACAAAGACACCAACTTTGGTGGCCCGGTTGATGGGTTTGGATCTTCTTCCAGGGACACACTCACCCTCTTTTTCTTCTTCTTCTTCTTCATGCCTTTCCACTCCAAACCCACTGGGCAATGTGCCACATCTGCACCGCCACTTGAGGCACAAACAACATATCCAAACCAAGCATAGAAACAGTATAGACAGCAGTGACATTGCAGCCACGAGATCTTTGCCCGAGACACCAAGAATCTCCTCATCAAGAAGATCAGATGTTGATTACCACCACAGATTCTCGCTTCAAATCAACAAGGAAAACATGAACCTTGGTGAGGATTTGGAGCTCCCTAGGCTCTCATTTTCCAAAAGAAAATGTGATGAGAACAATGGCAGGAGTCCAAGCCACTATGCCAGGCAAATAGTCAAACAGGTAAAGGAAAGTGTGGGAAGAAAAGTTGGCCAAGACATCACCAACAGTCTCAAAACAAGAGAGGAAATTGTAGGCCAACTCAAGAGCAAAAAATCTCCCAAAACATCATCACTGAAAGCCATTGATGAATCTGAAACTAGCCCACTAAAAGCACAGCCAAACACATCTTCCTATTCCCCAAGGCTTAGATTCATTGACAAGCACAAACCAAGCGCCACAACCACACCATCACCACTCACCCCAGATGACCAAAACATGCTGAAACTGCCACCACCTCCTCCTCCAGTTAACACTCAGCTTCCAAGAGTTTTAACAAAACCAAAGCCTCAAGTATTATTGTTACCGCAGCAGCAAGATTTTCACCAGAACAACCCAAAATGCAAAAAGTCTACCAATGAAAAGTTCAACTCAAGGCTCAAAAGACCTCCACAGACATCAGACATAATCAGAAACAAACAAGAAGAATCATTCATCATTCGTCCCACATCGCCAACTAGAGCCAGTGACACCAAAAGCTCCAAAAGCAAGAAAACTCATCCATTGTCAAGTAATCTCCTCAACAACATCAACAGTGTACCAAATCTTCTTCCTGTCAAGATAGACCATTCTCCTCCAGCTACCAAAATTCTTTCAAAACAGTCACAGGTGTGTGATAGTCAAGAGTCCAAAAGCAGCTCACAGTTATCTAGTTGTTCGCGCCAGAAGTACAAACAAGAAGGAACAACCGCACTCGCCACCCGAGAAACATCACAGAACAAACCTAACGGTGCCTCCGCCACCACCGGAGGAGCACCCCAATCTCACACCCCACAAGAGCTTCACTACATCACAGCAATCCTAGCCCGTACAACTGCCCTAAACGTAGAGGGCACCCCCACAAACCCAACATTGCTGTCCCTCCACCGCCACTGGTTCTCCCCAACCCACCCACTTAACCCATCAATCTTCCTCCATCTCGAAGACCCCGCCGCCGACAAAGATCTCAGCTTTGCCCCGAAAGACCAACTGGGTCACCGTTGGAACCGGAAGTTACTATTCGATCTGGTGGACGAGATTCTGAAGGAGATTCTGCAAGAGAGAGAGAAGAGGCTTTGGTTTTCGAAGGATGTTGCTGGTTGTAGGCACAGTGGGAGCGTTGTGGAGAGGGTGTGGAAGAGGGTGGGGGAGTTCCCACGTGCCAAGTGTGAGGTGTTGGAGGACATCGATGGGTTGATTGAAGGAGAGGACATGGAGAGAGAGAAGGATGGTGAAGGGTTGGAGGAAGAAGGAGAAGGGTTGGTGGCAGAGATTGAAGGGAACATATGGGGCACGTTAGTGCATGAAACGGTTATGCTTATGGATTTGCTTGGGAAATGTGAGAATAGAGAAATTATTAGATGA 2205 0.4621 MGREWYFAGRSSKRGVVVGGGGGGGEAEAQEPSGCMCAVFQLFDFHPFHFPNINQQQTSFKPPSCSLEDHTRVSKGAEAPRNSLESEDGDGHVSSLSSKEEDFKIPKNIVQIKTSGGTTTGGGNLNDLPAEITSSPGTKTPTLVARLMGLDLLPGTHSPSFSSSSSSCLSTPNPLGNVPHLHRHLRHKQHIQTKHRNSIDSSDIAATRSLPETPRISSSRRSDVDYHHRFSLQINKENMNLGEDLELPRLSFSKRKCDENNGRSPSHYARQIVKQVKESVGRKVGQDITNSLKTREEIVGQLKSKKSPKTSSLKAIDESETSPLKAQPNTSSYSPRLRFIDKHKPSATTTPSPLTPDDQNMLKLPPPPPPVNTQLPRVLTKPKPQVLLLPQQQDFHQNNPKCKKSTNEKFNSRLKRPPQTSDIIRNKQEESFIIRPTSPTRASDTKSSKSKKTHPLSSNLLNNINSVPNLLPVKIDHSPPATKILSKQSQVCDSQESKSSSQLSSCSRQKYKQEGTTALATRETSQNKPNGASATTGGAPQSHTPQELHYITAILARTTALNVEGTPTNPTLLSLHRHWFSPTHPLNPSIFLHLEDPAADKDLSFAPKDQLGHRWNRKLLFDLVDEILKEILQEREKRLWFSKDVAGCRHSGSVVERVWKRVGEFPRAKCEVLEDIDGLIEGEDMEREKDGEGLEEEGEGLVAEIEGNIWGTLVHETVMLMDLLGKCENREIIR 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03100 734 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 723 - -
Spst4g03100 734 MobiDBLite consensus disorder prediction 198 217 - -
Spst4g03100 734 Pfam Domain of unknown function (DUF4378) 547 716 IPR025486 -
Spst4g03100 734 MobiDBLite consensus disorder prediction 486 544 - -
Spst4g03100 734 MobiDBLite consensus disorder prediction 71 100 - -
Spst4g03100 734 MobiDBLite consensus disorder prediction 412 444 - -
Spst4g03100 734 Pfam DUF761-associated sequence motif 133 158 IPR032795 -
Spst4g03100 734 MobiDBLite consensus disorder prediction 54 100 - -
Spst4g03100 734 MobiDBLite consensus disorder prediction 393 463 - -
Spst4g03100 734 MobiDBLite consensus disorder prediction 187 224 - -
Spst4g03100 734 MobiDBLite consensus disorder prediction 299 371 - -
Spst4g03100 734 MobiDBLite consensus disorder prediction 304 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03100 Spst-Chr4 70376324 70379647 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g03100 110 717 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 34.165 1.52e-55 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03100 - - gmx:100795947 947.192
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03100 4 70376324 70379647 Spst4g03100 4 70376324 70379647 ECH
Spst4g03100 4 70376324 70379647 Spst10g01035 10 11030173 11033334 PCT