Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03088 ATGACCTCTTTCTCCTTTCAAAAATCAATCATGCCCCTCTTCTCTTTCACACACTACAAATTCCTTTGGAGATCTTCAATTGCATTTGCATTCTTCTTAACCCTTCTCTTAATTGCAAACTCACTCACTCTCCAAACCCAATCCACTCCAATCCCATGTAACAAAGACCCCTACAAGCAACTCAACCTAATCCTCAACCAAAACGGCACCGTCACGCGCCCCAACAAACCGCCCGAGAGCCCGCCCGCAGCGGATCCCACTCTCCTCGTACTCTCCAAGGACCTCTCCATCAACCAATCGAAGGGCACGTGGGCGCGGGTGTACCTGCCCCGCGTGGCACTGGATCACCGCTCCAAGCTCCCGCTGGTGGTCTTCTTCCATGGGGGCGGGTTCATTTTCCTCAGTGCGGCCTCAACGATCTTCCACGAGTTTTGCTTCAACATGGCAAACGACGTCGTTGCGGTCATAGCGTCCGTGGAGTACCGTCTCGCACCGGAACATAGACTCCCCGCGGCGTACGATGATGCCGTGGAGGCGTTGCACTGGATCAAAGCCAACCAGGACGATTGGCTGAAAAACCTCGTCGATTACTCCAACCTTTTTCTAATGGGTAGTAGTGCGGGGGGAAACATCGCCTACAACGCAGGTCTACGTGCAGCTGCGGCTGATGAAGATCAGATTCCCAAGATGAAAGGGCTTATATTAGTTCAACCGTTTTTCAGTGGGACCCGGAGGACAGGTTCGGAGCGGAGGCTCGTGAACGAACCTCATTTGGCGCTTTGCTTTAATGACGCCATGTGGGAGTTATCGTTACCGGTTGGGGTTGACCGTGATCACGAGTATTGCAATCCAATGGCGGGGAACGGTCCTGAGAGATTGGGAATGATGAAACGGCGTGGATGGTGGGTGCTGGTTACCGGGTGTGGAGGTGACCCACTGGTGGATCGTCAGATGGAGGTGGTAAGGTTGATGCAAAAGAAGGGTGTGAGAGTTGTGGGGCATTTCACCGCAGGGGATTATCATGGTGTTCAAGATAGTGATCCATTGAAGGCAAAGGAACTATATGAGGTAATCAAAACTTTTATTTCAGCTTTAAATTAA 1101 0.5168 MTSFSFQKSIMPLFSFTHYKFLWRSSIAFAFFLTLLLIANSLTLQTQSTPIPCNKDPYKQLNLILNQNGTVTRPNKPPESPPAADPTLLVLSKDLSINQSKGTWARVYLPRVALDHRSKLPLVVFFHGGGFIFLSAASTIFHEFCFNMANDVVAVIASVEYRLAPEHRLPAAYDDAVEALHWIKANQDDWLKNLVDYSNLFLMGSSAGGNIAYNAGLRAAAADEDQIPKMKGLILVQPFFSGTRRTGSERRLVNEPHLALCFNDAMWELSLPVGVDRDHEYCNPMAGNGPERLGMMKRRGWWVLVTGCGGDPLVDRQMEVVRLMQKKGVRVVGHFTAGDYHGVQDSDPLKAKELYEVIKTFISALN 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03088 366 Pfam alpha/beta hydrolase fold 123 343 IPR013094 GO:0016787
Spst4g03088 366 SUPERFAMILY alpha/beta-Hydrolases 78 349 IPR029058 -
Spst4g03088 366 Gene3D alpha/beta hydrolase 58 365 IPR029058 -
Spst4g03088 366 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 123 139 IPR002168 GO:0016787
Spst4g03088 366 PANTHER ARYLACETAMIDE DEACETYLASE 65 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03088 Spst-Chr4 70257360 70258460 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g03088 67 358 Carbohydrate Esterase AT5G16080 36.721 1.16e-54 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03088 - - gmx:100792597 620.157