Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03086 ATGAACTTGAAACAGTACTGTTGCTTCCTCTTAGATGAAGGGCAAAGCAAAATTCAGATTGCTAAGAAGAACAGTAGGGATTATCCATGGGAAATGTACACCTTGAAGGAGTTGCTGAGAGCAACAAACAACTTTCATCAAGATAATAAGATTGGAGAGGGTGGATTTGGAAGTGTTTATTTTGGTCGAACAAGTAAAGGCGTTCAGATTGCAGTGAAGCGATTGAAGACAATGACTGCTAAAGCAGAAATGGAGTTTGCAGTGGAAGTGGAAGTATTAGGAAGAGTGAGGCACAATAATTTGCTGGGATTGAGGGGATTCTATGCAGGAGGAGAGGAAAGGTTGATTGTGTATGATTACATGCCTAATCACAGCTTGCTAACACATTTGCATGGTCCACTTGCAAAGGAATGTCAGCTAGATTGGGCAAGAAGAATGAGCATAGCCATTGGAGCTGCTGAAGGTTTAGCGTACTTGCACCATGAGTCAACTCCTCACATCATACACAGAGATATAAAGGCAAGTAATGTTCTTCTAGACTCTGAATTTCAAGCCAAGGTTGCTGATTTTGGTTTTGCAAAGCTAGTACCAGATGGTGTGACCCATCTCACCACAAAGGTTAAAGGCACCCTAGGATATTTGGCTCCAGAATATGCCATGTGGGGAAAAGTTTCTGAGAGTTGTGATGTCTACAGCTTTGGAATTTTACTGTTGGAGATTATTAGTGCCAAGAAACCCATTGAGAAATTTCCTGGAGGAGTGAAAAGGGATATTGTTCAATGGGCCATACCATATGTCGACAAAGGTCTCTTCAACAATATTGCAGATACAAAATTGAAGGGGAAATTTGATTTGCAGCAGCTGAAAAATGTGATCACGATAGCTCTTAGATGCACTGATAATAGCGCAGATAAGAGGCCTAGCATGAAAGAGGTCGTGGATTGGCTCAAGAATGGTGTAGGGAGCACTTAG 972 0.4167 MNLKQYCCFLLDEGQSKIQIAKKNSRDYPWEMYTLKELLRATNNFHQDNKIGEGGFGSVYFGRTSKGVQIAVKRLKTMTAKAEMEFAVEVEVLGRVRHNNLLGLRGFYAGGEERLIVYDYMPNHSLLTHLHGPLAKECQLDWARRMSIAIGAAEGLAYLHHESTPHIIHRDIKASNVLLDSEFQAKVADFGFAKLVPDGVTHLTTKVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIISAKKPIEKFPGGVKRDIVQWAIPYVDKGLFNNIADTKLKGKFDLQQLKNVITIALRCTDNSADKRPSMKEVVDWLKNGVGST 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03086 323 Pfam Protein kinase domain 45 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g03086 323 PIRSF ILK 15 320 - -
Spst4g03086 323 Gene3D Transferase(Phosphotransferase) domain 1 121 320 - -
Spst4g03086 323 CDD STKc_IRAK 51 318 - -
Spst4g03086 323 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Spst4g03086 323 SMART serkin_6 45 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g03086 323 Gene3D Phosphorylase Kinase; domain 1 10 120 - -
Spst4g03086 323 FunFam PTI1-like tyrosine-protein kinase At3g15890 17 120 - -
Spst4g03086 323 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 23 318 - -
Spst4g03086 323 ProSiteProfiles Protein kinase domain profile. 45 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g03086 323 FunFam PTI1-like tyrosine-protein kinase At3g15890 121 323 - -
Spst4g03086 323 SUPERFAMILY Protein kinase-like (PK-like) 26 318 IPR011009 -
Spst4g03086 323 ProSitePatterns Protein kinases ATP-binding region signature. 51 73 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03086 Spst-Chr4 70223411 70225338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g03086 34 317 Receptor kinase-like Gene Family AT4G02010 45.139 8.86e-83 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Spst4g03086 Pkinase 1.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03086 - - vra:106757402 623.624