Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03083 ATGATATGCATTGTTGTGTCCTCCAGGGACAAGGATACCCTACAAGTTGGTTTGAAGAAGGAAGTTGGAAGTTTGAAGAAGCATAAAAGACACACCGCCACGTCATCTCCATCACCACCACCACCACCACCACTTTTTCATTCCTCTTCTCGCCGCCACCGTCTCAGCCTTCTCCCTCCTCCTTCTCCTCTTCCTCCTCTGCCACCGCATCCTCACACGCAAACGCACCACCAACCCCCTTCCTCCCCCTTCCTCCTCCCCCCGCACCGCCTCTCATTCTCCGTCCTCCGCCGCGCCACCAACTCCTTCTCCTCCCGCCTCGGCCATGGGGGCTTCGGCCCCGTCTTCGCCGGCATCCTCGCCGGCGACCCTGTCGCGGTTAAGCTCATGGACTCCGCCTCCTCCCACCAGGGCGAGCGCGAGTTTCACAACGAACTCTTCTTTGCCTCCAAACTCCACTCTCGCCATGTCATCACCGCTACCCACTTCTCCTCCGACCCCAAACGACGCCGCTTTCTCTTGGTCTACGAGCTCATGCAAAACGGTAACCTCCAAGACGCGCTTTTGCACCGTAAGTGCCCCGAACTCTCAAACTGGAACACCCGCTTCTCAATTATTCTCAACATAGCCAAAGGAATTCACTTTCTCCACTCATGTGATCCCTCTGTTCTCCATGGAGACATAAAGCCGAGTAACGTTTTGCTTGATCGAGATTTCTTGCCCAGGATCGGTGATTTTGGGTTGGCGAGGTTGAGTTCGGAGCCTCCGAGGTTCGAAATTGAGGTTCTGGAGTGTGGTAGTGTTAATAATGATCAAGAGAAGGGGAAGATGAAGAAGGAGGAGGAGGTTGATGATTGTGGATCCGTGGAGAGTACTCATAGTGTTTTTATGGAAGAAGGTAGCCTGGGGGTGGAGCAATCTCCCTCCCCGGAGATGGCGGCGATGGTAGCGACGACTTCGCCGGAGACGGGTTTGGCGGAGGCTGCTGCGTCGCCAGGGTTTGAGAAGGAGGATGCGAAGAAGATGAATGGGAAAGGGTTGAAGAGTAATTCGGTGAGGGATTGGTGGTGGAAGCATGAGAATGAGGTTGGGGGTGGGGAGAGTAAGAAGGTTAAGGATTATGTTATGGAGTGGATTGGGAGGGATGTGAATAAGGATAGGGTGAAGGGTGGAATTGAGTATGACGATGTGGAGACTGGGAAGGAAGGAAGAAAGAAGAAGAAGAAGAAGAAAAGGGGGAAGGAATTGGAATGGTGGGAGTCAATGGAAGAGGAAAAGGTTGATGGGGTTGTAAAGGCGAAGAGAAGGACGGTGAGGGAGTGGTGGAAGGACGAGTGTTTTGAGGAGAATGAAAATAAGAAGAAGAAGAAAAAGAGGAAAGGTGGAAGTGTGAAGAGTGATGATATTGAGAATGGTGATGATTGGTGGGTGAGTGATGATGCAATTGATAAGAGGAACCACAAAAGTAGGAGTAGGAACAACCGTGGGAACATGGATTGGTGGATGGATGGGTTGAGTGGTGAGTTATGGAGAGGAAGGAGGAATAATAGCTTCGATTCTGCTAGTGGGGAAATTCCAAAGAGTGGTGGTGTTAGTAGTACTCCTAGTATGAGGGGAACTGTCTGTTATGTTGCTCCTGAATGTGGCTATGGTGGGGATGTGACTGAGAAATGTGATGTGTATAGCTTTGGGGTGTTGTTGCTTGTGATAATTTCTGGGCGGCGCCCACTTCAGGTGAGTGGTTCACCCTTGTCTGAGTTTCAGAGGGCGAACTTACTTTCCTGGGCGCGCCATTGTGCACGAAATGGGAAGCTTGTTGAGTTGGTTGATGAGTGTATTCAGTTGTTGGATAAGGAGCAAGCTCTTCTCTGTATCAAGGTGGCTTTGCTTTGTTTGCTGAAGTCACCTTCTCGTCGTCCTTCAATGAAGGAGGTTGTGGGGATGCTTAGTGGGGAGGTGGAACCACCCCAATTGCCTGTTGAGTACTCTCCTTCAACCCCTTCTCGGTACCCTTTCAAGTCTAGGAGAAAAGGCAGGTGA 2040 0.5118 MICIVVSSRDKDTLQVGLKKEVGSLKKHKRHTATSSPSPPPPPPLFHSSSRRHRLSLLPPPSPLPPLPPHPHTQTHHQPPSSPFLLPPHRLSFSVLRRATNSFSSRLGHGGFGPVFAGILAGDPVAVKLMDSASSHQGEREFHNELFFASKLHSRHVITATHFSSDPKRRRFLLVYELMQNGNLQDALLHRKCPELSNWNTRFSIILNIAKGIHFLHSCDPSVLHGDIKPSNVLLDRDFLPRIGDFGLARLSSEPPRFEIEVLECGSVNNDQEKGKMKKEEEVDDCGSVESTHSVFMEEGSLGVEQSPSPEMAAMVATTSPETGLAEAAASPGFEKEDAKKMNGKGLKSNSVRDWWWKHENEVGGGESKKVKDYVMEWIGRDVNKDRVKGGIEYDDVETGKEGRKKKKKKKRGKELEWWESMEEEKVDGVVKAKRRTVREWWKDECFEENENKKKKKKRKGGSVKSDDIENGDDWWVSDDAIDKRNHKSRSRNNRGNMDWWMDGLSGELWRGRRNNSFDSASGEIPKSGGVSSTPSMRGTVCYVAPECGYGGDVTEKCDVYSFGVLLLVIISGRRPLQVSGSPLSEFQRANLLSWARHCARNGKLVELVDECIQLLDKEQALLCIKVALLCLLKSPSRRPSMKEVVGMLSGEVEPPQLPVEYSPSTPSRYPFKSRRKGR 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03083 679 MobiDBLite consensus disorder prediction 17 84 - -
Spst4g03083 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
Spst4g03083 679 Gene3D Transferase(Phosphotransferase) domain 1 88 269 - -
Spst4g03083 679 ProSiteProfiles Protein kinase domain profile. 101 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g03083 679 Pfam Protein tyrosine and serine/threonine kinase 535 648 IPR001245 GO:0004672|GO:0006468
Spst4g03083 679 Pfam Protein kinase domain 105 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g03083 679 MobiDBLite consensus disorder prediction 654 679 - -
Spst4g03083 679 Gene3D Transferase(Phosphotransferase) domain 1 517 656 - -
Spst4g03083 679 MobiDBLite consensus disorder prediction 58 84 - -
Spst4g03083 679 SMART serkin_6 101 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g03083 679 SUPERFAMILY Protein kinase-like (PK-like) 78 668 IPR011009 -
Spst4g03083 679 PANTHER OS07G0586332 PROTEIN 80 678 IPR044576 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03083 Spst-Chr4 70176286 70181381 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g03083 86 254 Receptor kinase-like Gene Family AT1G29750 43.182 2.93e-29 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Spst4g03083 Pkinase 2.3e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03083 - - gmx:100794183 1004.97