Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03056 ATGGAGGAAAAAGAGATTTTTAGTTCTGGGCAGGCTGTTAAGGTTGTCGAACCCCCCCAGAGCTTCCACGTGGCACTAAACTCCGTGCAGTTTTCTGGGCCCACGGTGGATTCACCGACACCGGTGAGTGCTCCGGTGATTACTTCCGGTAGCACAGAGGGGAAGAAGAAGAGGGGCAGGCCTAGGAAATATGGACCGGACGGCAATTTGGCTCTGTCGCCGATGCCGATATCCTCGTCGATTCCATTGACTGGAGACTTTTCAGCCTGGAAAAGGGGTAGAGGAAAACCAGTTGAATCAATCAAGAAGTCTTTTAAGTTTTATGAAGTTGAAGGTCAAGGCGCAGGACCAGGCGATCGGATTGCATACTCAGTTGGTGCCAATTTCACACCTCACATCCTTGTAGTAAATGCTGGCGAGGATGTTACTATGAAGATTATGTCCTTCTCTCAACAAGGATGTCAAGCGATCTGCATTCTCTCTGCAAACGGCACAATTTCAAATGTTACACTACGCCAACCAACTTCTTCTGGTGGCACTTTAACATATGAGGGGCGCTTTGAAATTCTTTCCTTGACTGGTTCATATATGCCAACTGAGAATGGGTTAACAAAGAGCAGATCTGGTGGGATGAGCATCTCTTTGGCCGGTCCAGATGGTCGAGTAATGGGGGGTGGACTTGCTGGTTTGCTGGTAGCTGCAGGTCCTGTGCAGGTTGTTGTGGCTAGTTTCCTTCCTGGTCATCAGCTGGAGCAGAAACCGAAGAAGCCAAGGGTGGAACATGTACCAATGATTGCCCCTACTCCTGTCGAAGAAATAAGAATTGACCTTGGTGAAGTAAAGCCAATCTTGACACCAGCTGCTTTTCAAATGGACAGCATTTTTGGCAATGGACAACCTTCTGATGATGAAGCTCCTTTCCCTGAAGAAGAGCCTAACACAAGCTATGCAGATGCTGGAGTTGCTAGCTAA 972 0.4815 MEEKEIFSSGQAVKVVEPPQSFHVALNSVQFSGPTVDSPTPVSAPVITSGSTEGKKKRGRPRKYGPDGNLALSPMPISSSIPLTGDFSAWKRGRGKPVESIKKSFKFYEVEGQGAGPGDRIAYSVGANFTPHILVVNAGEDVTMKIMSFSQQGCQAICILSANGTISNVTLRQPTSSGGTLTYEGRFEILSLTGSYMPTENGLTKSRSGGMSISLAGPDGRVMGGGLAGLLVAAGPVQVVVASFLPGHQLEQKPKKPRVEHVPMIAPTPVEEIRIDLGEVKPILTPAAFQMDSIFGNGQPSDDEAPFPEEEPNTSYADAGVAS 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03056 323 MobiDBLite consensus disorder prediction 32 50 - -
Spst4g03056 323 MobiDBLite consensus disorder prediction 292 323 - -
Spst4g03056 323 MobiDBLite consensus disorder prediction 32 70 - -
Spst4g03056 323 SUPERFAMILY AF0104/ALDC/Ptd012-like 128 252 - -
Spst4g03056 323 Pfam Plants and Prokaryotes Conserved (PCC) domain 131 244 IPR005175 -
Spst4g03056 323 Gene3D - 131 261 - -
Spst4g03056 323 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 35 260 IPR039605 GO:0003680
Spst4g03056 323 FunFam AT-hook motif nuclear-localized protein 1-like 131 261 - -
Spst4g03056 323 ProSiteProfiles PPC domain profile profile. 126 268 IPR005175 -
Spst4g03056 323 CDD DUF296 130 244 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03056 Spst-Chr4 69912331 69917293 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g03056 40 259 AT-hook Motif Nuclear Localized (AHL) Family AT5G62260 62.931 2.47e-87 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03056 - - gmx:102667678 501.901