Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03036 ATGGAGTGCAATAAAGATGAGGCTACCAGGGCGAAAGAAATTGCTGAGAGAAAGTTTGCTGCAAAGGATATATCGGGTGCAAAGAAATTTGCTTTGAAGGCCCTAAATTTATTTCCTGAACTTGAGGGTATTTCTCAAATGGTAGCAACACTTGATGTGTATATTTCAGCCGAGAACAAAACAAATGGAGAAGCAGATTGGTATGGTGTACTTGGTGTGGATTCCTTTGCTGATGATGATACGGTCAGGAGACAGTACAGGAAGCTAGCTCTCATGCTTCACCCTGATAAGAACAAGTCCGTTGGAGCTGATGGGGCATTTAAGCTTGTTTCAGAGGCATGGAGTTTACTATCAGATAAGGCTAAAAGGGCAGCTTATGACAAGAGAAGTGGAAAAGAACGGAAAGCTTCTACTAAGTTCGGAGGTTCATCAACACAGAAAAGGACTAATGGTAGCTACAATTTTACTAAAACTACCCCTTCAAGTGCAACTGCTCATAAGAATACTGCTAAAGATCACACTTCATCTTCTACTCATAAGTCAAAATCAAGTACATTTTGGACCGTCTGCTCTCGATGCAAAATGCAATATGAGTATCTTAGAGTTTATATTAACCTTAAACTCTTATGTCCCAACTGCCGTGCAGCATTTGTGGCTGTGGAGACTGCTCCTCCACCTGCAAGTGGTATTAGACCTGCAACTCAATGGAATTTTGCACAGAAGAAGCAAAATTCCAACCGCCAAGTACCTAACAAAAGCAAATCTAGTGCCGGAAAGAATAACATGGCGGCTCCAAATGTTGGAGCAGGGTCTTATAGTAAGACTGAAGCAGCCAGTTTTCAGTGGTCTGCATTCTCAAAATCATCCGGTGTTTCCAATGTGGCTCAGGCTGCAAGTGTGGTTCAGCAAGCATATGATAAAGTGAAGCGAGATCGTGAGGAGGCACAAGCAGCTAGCAAAAGGGAAGAGGCCTTAAAAAGGAAGCAGCATGTTTCTAAAAAGGGTTACTCTAATCCTGCTAAGAAAAGAAGAGGGGGCATGGAGGATGCAAGTGCAAGTGGTGGTAAGGAAAATCGAATGGGTGGGGGAACAAACTCATCCAAACAGGCTAATTTTGAATATAATAGGGTTAATGGAACCAACAAGACTGACTGTGTGAGGTATGTCTCCCCAGATGAACTTCGGAATCTTCTTATGGAGAAAGCTAGAAAAGAAATTAGCAATAAACTCAGGGAAAATCAGTCAAATGTTGTTGATAAAACAGTGGTGAAAGAGAGTGGAAATGACTTACATAAAGTTAACGAGAAAGGAGAAAAATGTTTAAGAAACTCTGAGATGTGTGCTCAAGATAACATTGAGAAGCCTTCTGGATCTAAAACCATCAAGTCATTAGCAGGTTCTACAGTTGCTAAAGGTAACAGAAAATTTTTGGAAACAACAGCTATAGATGTACCAGATCCTGACTTCCATGATTTTTATAAGGATCGAACTGAAATATCTTTCTCTGAAAATCAAGTATGGGCTGTGTATGATAACAATGACGGGATGCCTCGATGTTATGCAATGATTCACAGCGTCATCTCCCTGAATCCGTTCAAGATGCAAATCAGTTGGCTCAACCCAAATACGAACAGTAAACTGGAACCTATTAAATGGGTTGCTTCAGGCTTTTCAAAAATTTGTGGGGATTTCAGATTGAGCAGACCTGAAATCTGTAGCTCGACCAATTTTTTCTCCCACAAGGTTAGATGGAGAACAGGTGCTGATGGGGCTATTTGTATATATCCCAGGAAAGGGGATGTTTGGGCTATATACAGGAATTGGTCTCCTGACTGGGATGAGCTAACACCAGACGAAGTTGTACACAAGTTTGATGTGGTTGAAGTACTTGAGGATTTTGTTGAAGGGCATGGCATAGATGTTATTCCTCTGATCAAAGTGGCTGGATTCAGGACAGTATTTCACTACCACTTAGATCCAAGAGAAATTAGGATTATTCGGATGGAAGAGATGTTTCGATTCTCTCATCAAATACCTTCATATGTACTCACTGGTCAAGAAGCTCCAGATGCTCCAAAGGGTTGCAGGGTGTTGGACCCAGCTGCTGCTCCATTTGAATTTCTTCAGGTAATAGAAGTTGTGAAGGAGGAAGATATGGCAGATTATGAGGATACTGATGTCAAGGAAACAAGAGATAACATGAAAAAAGATAGTAACAAGGAAATGATCAATGGTATGGTAAAATTGGTGGAAGAAAAGAAGGGAAAGGACGAAGACATGCAGGAAATGAAAACAAGTGACATCATGAAAAAGGCTAGTAAGGAGGGAATAATGGGAAAACTTGGGGAAGAAAAGCAGCGAAAGGACGAAGCCATGTAG 2379 0.4115 MECNKDEATRAKEIAERKFAAKDISGAKKFALKALNLFPELEGISQMVATLDVYISAENKTNGEADWYGVLGVDSFADDDTVRRQYRKLALMLHPDKNKSVGADGAFKLVSEAWSLLSDKAKRAAYDKRSGKERKASTKFGGSSTQKRTNGSYNFTKTTPSSATAHKNTAKDHTSSSTHKSKSSTFWTVCSRCKMQYEYLRVYINLKLLCPNCRAAFVAVETAPPPASGIRPATQWNFAQKKQNSNRQVPNKSKSSAGKNNMAAPNVGAGSYSKTEAASFQWSAFSKSSGVSNVAQAASVVQQAYDKVKRDREEAQAASKREEALKRKQHVSKKGYSNPAKKRRGGMEDASASGGKENRMGGGTNSSKQANFEYNRVNGTNKTDCVRYVSPDELRNLLMEKARKEISNKLRENQSNVVDKTVVKESGNDLHKVNEKGEKCLRNSEMCAQDNIEKPSGSKTIKSLAGSTVAKGNRKFLETTAIDVPDPDFHDFYKDRTEISFSENQVWAVYDNNDGMPRCYAMIHSVISLNPFKMQISWLNPNTNSKLEPIKWVASGFSKICGDFRLSRPEICSSTNFFSHKVRWRTGADGAICIYPRKGDVWAIYRNWSPDWDELTPDEVVHKFDVVEVLEDFVEGHGIDVIPLIKVAGFRTVFHYHLDPREIRIIRMEEMFRFSHQIPSYVLTGQEAPDAPKGCRVLDPAAAPFEFLQVIEVVKEEDMADYEDTDVKETRDNMKKDSNKEMINGMVKLVEEKKGKDEDMQEMKTSDIMKKASKEGIMGKLGEEKQRKDEAM 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03036 792 MobiDBLite consensus disorder prediction 311 330 - -
Spst4g03036 792 MobiDBLite consensus disorder prediction 127 181 - -
Spst4g03036 792 PRINTS DnaJ domain signature 86 101 IPR001623 -
Spst4g03036 792 PRINTS DnaJ domain signature 122 141 IPR001623 -
Spst4g03036 792 PRINTS DnaJ domain signature 68 86 IPR001623 -
Spst4g03036 792 PRINTS DnaJ domain signature 102 122 IPR001623 -
Spst4g03036 792 MobiDBLite consensus disorder prediction 752 792 - -
Spst4g03036 792 SMART dnaj_3 65 122 IPR001623 -
Spst4g03036 792 Pfam DnaJ domain 66 127 IPR001623 -
Spst4g03036 792 Coils Coil 301 328 - -
Spst4g03036 792 Pfam Domain of unknown function (DUF3444) 480 687 IPR024593 -
Spst4g03036 792 SUPERFAMILY Chaperone J-domain 60 126 IPR036869 -
Spst4g03036 792 PANTHER BNAC03G44070D PROTEIN 1 704 - -
Spst4g03036 792 MobiDBLite consensus disorder prediction 137 171 - -
Spst4g03036 792 Gene3D DnaJ domain 63 183 IPR036869 -
Spst4g03036 792 MobiDBLite consensus disorder prediction 311 370 - -
Spst4g03036 792 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Spst4g03036 792 CDD DnaJ 66 119 IPR001623 -
Spst4g03036 792 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Spst4g03036 792 MobiDBLite consensus disorder prediction 240 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03036 Spst-Chr4 69765024 69767402 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g03036 4 229 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 34.746 1.83e-33 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03036 - - gmx:100816712 1253.81