Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03021 ATGAAGCTGAAGGTGCGTTTGGTGTTGAAGAAGCCGTCTTGGACACGCTTGTTGAGAACGTCACGGAGTACACGGTTACCGCGGAGCTTCAGGCGGCGGCGAGGTCGCCGTAGTAAGCGGTGGTCCGGAAAGGGTTTGGGACTTAGGGTTGTGGCGAAACGACGACGTAGACTGGAGAAGGGTGTCAGGATTACAATTTTTTCGATACTGCACAAAACCCTTTTAAAGTCTTTGAAGATTGTGATCATGGCTAATTTGCTGACACTGTTTTTTGTTGTGGAAATGATAGTAATGAGTGGTTTGAGTTTGGGAGCAAGTGGCTTGAACATGAACTACTACTTGTTTAGCTGCCCTTTGGTTGAACTTATTGTTAAGAACACAGTCAACAGAGCTCTGCAGAATGATCCCACCCTAGCAGCAGGGCTTGTTAGAATGCACTTCCATGACTGCTTCATAGAGGGTTGCGATGGCTCAGTTCTGATTGACTCCACCAAGGACAACACAGCAGAAAAAGATTCACCAGCAAATTTGAGCTTGAGGGGCTATGAAGTAATAGATGATATCAAGGAAGAGCTTGAGAAACAATGCCCAGGAGTGGTTTCATGTGCTGACATTCTTGCTATGGCTGCTAGAGATGCAGTTTTCTTTGCAGGGGGTCCTGTATATGACATACCAAAAGGAAGAAAGGATGGAACAAGGTCCAAAATTGAGGATACTATCAATCTTCCTGCACCCATTTTCAATGCTTCTCAACTCATAAAGATGTTTGGGCAACATGGGTTTTCTGCAAAAGAAATGGTGGCTCTCTCAGGAGCTCACACATTAGGAGTGGCAAGGTGTTCTTCATTCAAGCAGAGACTGACTCCACTGGATCCATCTTTGGACGCACAATTTGCAAAGACACTCTCCAAGACATGCAGTGCTGGTGACACTGCAGAGCAACCATTTGACTCCACGAGAAACGATTTCGACAACCTATACTTCAACGCTCTGGTCTCAAACAACGGTGTTCTCACATCAGACCAAACGTTGTACACTACCCCACAAACCAGGAACATTGTGAACTCTTATGCAATGAACCAGGCCTTGTTCTTCTTGGATTTTCAACAGGCAATGGTGAAGATGAGCACGCTCGATGCCAAAGAAGGGTCCAAAGGGGAAGTACGAAAAAATTGTCATAAAATAAACTGA 1191 0.4534 MKLKVRLVLKKPSWTRLLRTSRSTRLPRSFRRRRGRRSKRWSGKGLGLRVVAKRRRRLEKGVRITIFSILHKTLLKSLKIVIMANLLTLFFVVEMIVMSGLSLGASGLNMNYYLFSCPLVELIVKNTVNRALQNDPTLAAGLVRMHFHDCFIEGCDGSVLIDSTKDNTAEKDSPANLSLRGYEVIDDIKEELEKQCPGVVSCADILAMAARDAVFFAGGPVYDIPKGRKDGTRSKIEDTINLPAPIFNASQLIKMFGQHGFSAKEMVALSGAHTLGVARCSSFKQRLTPLDPSLDAQFAKTLSKTCSAGDTAEQPFDSTRNDFDNLYFNALVSNNGVLTSDQTLYTTPQTRNIVNSYAMNQALFFLDFQQAMVKMSTLDAKEGSKGEVRKNCHKIN 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03021 396 ProSitePatterns Peroxidases proximal heme-ligand signature. 265 275 IPR019793 -
Spst4g03021 396 FunFam Peroxidase 243 375 - -
Spst4g03021 396 CDD secretory_peroxidase 107 395 IPR033905 GO:0004601|GO:0042744
Spst4g03021 396 PRINTS Plant peroxidase signature 218 233 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g03021 396 PRINTS Plant peroxidase signature 199 209 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g03021 396 PRINTS Plant peroxidase signature 180 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g03021 396 PRINTS Plant peroxidase signature 117 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g03021 396 PRINTS Plant peroxidase signature 314 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g03021 396 PRINTS Plant peroxidase signature 330 347 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g03021 396 PRINTS Plant peroxidase signature 370 383 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g03021 396 PRINTS Plant peroxidase signature 264 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g03021 396 PRINTS Plant peroxidase signature 141 161 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g03021 396 PRINTS Haem peroxidase superfamily signature 218 230 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst4g03021 396 PRINTS Haem peroxidase superfamily signature 265 280 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst4g03021 396 PRINTS Haem peroxidase superfamily signature 200 217 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst4g03021 396 PRINTS Haem peroxidase superfamily signature 139 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst4g03021 396 PRINTS Haem peroxidase superfamily signature 316 331 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst4g03021 396 ProSitePatterns Peroxidases active site signature. 139 150 IPR019794 GO:0004601
Spst4g03021 396 Gene3D - 111 396 - -
Spst4g03021 396 PANTHER - 90 396 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g03021 396 FunFam Peroxidase 111 250 - -
Spst4g03021 396 ProSiteProfiles Plant heme peroxidase family profile. 107 396 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst4g03021 396 Gene3D Peroxidase, domain 2 243 375 - -
Spst4g03021 396 Pfam Peroxidase 124 359 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst4g03021 396 SUPERFAMILY Heme-dependent peroxidases 107 396 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03021 Spst-Chr4 69670035 69679370 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g03021 81 396 Peroxidase AT4G33420 71.835 3.13e-170 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03021 K00430 - gmx:100809245 588.956