Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02979 ATGAGAGAAAATATTTCAGGGTCATGGCTAGTTATGATCTCTGTGATATTGTTCACTGCAATGTTGGCAAAATTAATTCAATTCAAGTTAAGGAATGAAGATAAAAGCAAATGCAGATTACCGCCAGGAAGAAGAGGGTGGCCTTTGATTGGAGATAGCATCAATTGGTACAACGCTGTGGCAAGTTCTCATCCTCCTCAGTTTGTTGAAGAAATGGTGAAGAGGTATGGTAAGATATTTTCATGCAGCCTATTTGGCAAATGGGCAGTGGTGTCAGCAGATCCAAGCTTCAACCGCTTTGTAATGCAAAATGAAGGCAGATTATTCATTTCTAGCTACCCAAAATCTTTCAGAGATTTGGTGGGTAAAAATGGTGTGATCACAGTGCAAGGAGAGCAACAACGGAAACTACATGGAATTGCTTCCAATATGATGCGTCTGGAGAAGCTTAAGTTCCATTTCTTGAATGATATCCAAAAGGTCATGCTCCAAACTTTGAGCAATTTTAACAACAACCAAGTCATTCTTCTTCAAGATGTTTGTAGGAAAGTGGCTATACATTTAATGGTCAATCAACTATTGGGGGTTTCAAGTGAGTCTCAGGTCAATGAAATGTCTCAGTTGTTTTCTGACTTTGTTGATGGTTGTTTATCCATTCCTATCAACATCCCTGGCTATGCATATCACACTGCTATGAAGGCAAGGGAGAAAATCATAAGCAAGATAAACAAGATCATTGAGGAGCACAGACAAAATTGTGCTCCCATGGAAGGTAATGGTGTACTTGGAAGATTACTAGAGGAAGAAAGCTTGCCAGATGATGCTGTTGCAGACTTCATTATCAATCTACTCTTTGCGGGAAATGAAACAACCACTAAAACAATGCTCTTTGCAGTCTATTTCCTTACTCAATGTCCTAGAGCCATGAAGCAGTTGCTGGATGAACATAGTTCCCTGAGGACTGGAGATGAATTTCTTACTTGGCAGGATTATAAAGCAATGACATTCACTCAATGTGTTATTGATGAAACACTGAGACTTGGGGGCATTGCAATTTGGTTAATGAGAGAAGCAAAAGAAGACATTCAATACCAAGATTTTGTTATTCCCAAAGGGTGCTTTGTGGTTCCATTTCTTTCAGCAGTCCATTTAGATGAGAAAGTATACAGTGGAGCTTTAAACTTCAATCCTTGGAGATGGATGGAACATGAAAATGAGGAAAAGAGAATCTGGAGAAGTAGTCCATTCTATGCACCCTTTGGAGGAGGTGCCAGATTCTGTCCAGGAGCAGAGCTGGCTCGCCTTCAGATTGCTCTTTTTCTTCATTACTTTGTAACTTCTTACAGATGGACACAAATGAAGGAGGATAGGATGTCCTTCTTTCCCTCTGCTCGTTTGGTGAATGGTTTTGAAATCTGCTTAATAAGAAGACATAGTGAAACAGATTGA 1449 0.3975 MRENISGSWLVMISVILFTAMLAKLIQFKLRNEDKSKCRLPPGRRGWPLIGDSINWYNAVASSHPPQFVEEMVKRYGKIFSCSLFGKWAVVSADPSFNRFVMQNEGRLFISSYPKSFRDLVGKNGVITVQGEQQRKLHGIASNMMRLEKLKFHFLNDIQKVMLQTLSNFNNNQVILLQDVCRKVAIHLMVNQLLGVSSESQVNEMSQLFSDFVDGCLSIPINIPGYAYHTAMKAREKIISKINKIIEEHRQNCAPMEGNGVLGRLLEEESLPDDAVADFIINLLFAGNETTTKTMLFAVYFLTQCPRAMKQLLDEHSSLRTGDEFLTWQDYKAMTFTQCVIDETLRLGGIAIWLMREAKEDIQYQDFVIPKGCFVVPFLSAVHLDEKVYSGALNFNPWRWMEHENEEKRIWRSSPFYAPFGGGARFCPGAELARLQIALFLHYFVTSYRWTQMKEDRMSFFPSARLVNGFEICLIRRHSETD 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02979 482 FunFam Cytochrome P450 720B1 family 30 477 - -
Spst4g02979 482 PRINTS E-class P450 group IV signature 411 427 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02979 482 PRINTS E-class P450 group IV signature 427 445 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02979 482 PRINTS E-class P450 group IV signature 383 401 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02979 482 PRINTS E-class P450 group IV signature 277 303 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02979 482 PRINTS E-class P450 group IV signature 67 90 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02979 482 PRINTS E-class P450 group IV signature 334 350 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02979 482 CDD CYP90-like 73 472 - -
Spst4g02979 482 PANTHER CYTOCHROME P450 26 37 453 - -
Spst4g02979 482 Pfam Cytochrome P450 41 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02979 482 SUPERFAMILY Cytochrome P450 36 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02979 482 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 420 429 IPR017972 GO:0005506|GO:0016705
Spst4g02979 482 Gene3D Cytochrome P450 29 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02979 482 PRINTS P450 superfamily signature 286 303 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02979 482 PRINTS P450 superfamily signature 427 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02979 482 PRINTS P450 superfamily signature 339 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g02979 482 PRINTS P450 superfamily signature 418 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02979 Spst-Chr4 69279040 69282598 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02979 6 480 Cytochrome P450 AT1G73340 72.349 0.0 730
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02979 - - gmx:100806921 897.116
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02979 4 69279040 69282598 Spst4g02979 4 69279040 69282598 ECH