Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02914 ATGGCTAATTTTGAAAATGACAAGCGACCAATGCTGTCAGATACAGATGCACAAACCTACGATGAACCCTTGGATTCTAAGTTCCGAAGGATGGTAACCAGGACACAAAGTGCTTTAATTTCTATTCCTATGAGCTCCTTGGAATCATATGAGAAAGAAACTAGCTTTGTGGGACATACCGGTCCACTTCAGAGCAAGAGAAAAACACCCTTTATGCATATGAGTGGTCCATTATATGCTACCAATGGAACAGGAAATCTTTTGCAGAAGCATAATGTGTCGGGAAACGAAGCAGAGGAGAGAAAGAAAGATAATTTTGCTACTCTCCATGGCACAAGTTCAAATTACCCAAATATTGACTATGATAGAAAAAATGAACACTTACTAAGGTCTGGGCAACTGGGAATGTGCAATGATCCTTATTGTACTACTTGCCCAACTTACTTCAATGCTTCTGAGCAAAGAAATCCAAAACCTTCGGCTAGATGGGATCCAAAGGCTGTTGATAGCAGGCCTGTAGTCAAACAGGTCTATGTTAGGAAGAAGAAATTGGGCAAGGAGCTAGCAAGGACCAAACTAACATCAAGGGATGTGTTGTTGCGCAATTTCCATAATGCTCTTTATGGGGATGCCAAGAGTTTTGTGAGAAAACTTCTTTCTTTCTTCTCTTCTTATGTTCCTGGAGTTATGAACCCTCATGCGAAAGTTGTACAAAAGTGGAACAAATTTTTGGCAATATTTTGCTTAATTGGTATTTTTGTGGACCCATTGTTTTTCTTTTTACTCTATGTGGAGGAGGATAATAAATGCATTGTTATCAACTGGCCATTGACAACAGCACTTGTTTTATTTAGGTGGCTGAATGATTTTGTTTATTTCCTTAACATTCTTCTCCAGTTTAGGTTAGCTTATGTTTCTCGTGAGTCCAGGGTGGTTGGTGCTGGAGATTTAGTTGACCATCCACAGAAAATTGCTCTACATTACCTAAAGGGTTATTTCCTCATTGACTTATTTGTTGTATTTCCTCTTCCTCAGATAATGTTATTGTTTGTCCTACCAAATTCCTTGGGAGGAGCAAATCAGGCCAAGAATCTCCTGCGTGCAGCGATCTTAGTGCAATATTTTCCCAAGTTATTCAGGTTTTTGCCGCTGCTAATTGGCCAATCTCCAACAGGATTCATATTTGAGTCTGCTTGGGCAAATTTTATTATAAATCTTCTCATTTTTATGCTTGCTAGTCATGTTGTTGGCTCTTGCTGGTACCTCTTTGGTCTTCAGAGGGTTAATCAGTGTTTGCGAGATGCTTGCCGTCATTCTGATATACCTGGTTGCATGAAGTTCATTGATTGTGGACGCGGCCATCCTGACTTCACATCAAATCAGTGGATCAACAATACTGATGCTGCTGATTGTTTGAACACATCTTCTAATAGTTTCCCTTATGGGATTTATGTGAATGCTGTACCACTTACTATAGAAACTAATGCGGTCAAAAAGTATGTGTATTCTCTTTTCTGGGGATTCCAGCAAATCAGTACTCTGGCTGGTAATCTAGTTCCTAGCTATTTTGTGTGGGAAGTTCTTTTTACTATGGCCATCATAGGATCGGGACTCTTACTCTTTGCAATTCTCATTGGCAACATACAGAATTTTCTACAGGCTCTTGGACGGAGGAAGCTGGAAATGCAACTTAGAGGCCGTGACGTTGAGCAATGGATGAGCCATCGAAGATTACCAGAAGATCTAAGAAGGCGAGTAAGACAGGCTGAACGGTATAGTTGGGCCGCAACAAGGGGGGTGAATGAAGAAATGCTTATGGAGAATTTGCCAGAAGATCTGCAGAGAGACATAAGACGCCATCTCTTCAATTTTGTTAAGAACATTCGACTTTTTGCTCTGATGGATGAGCCTATATTAGATGCCATTTGTGAGAGACTAAGACAAAAGACATACATCAAAGGAAGTAAAATTCTGAGTCATGGTGGTCTGGTGGAAAAGATGGTATTCGTGGTGCGTGGCAAATTGGAGAGCATTGGAGAAGATGGAACCAAAATTCCTCTATCTGAAGGGGATGCTTGTGGTGAGGAACTTCTGACATGGTATCTTGAACATTCTTCAGTGAGCACAGATGGTAGAAAAGTAAGGCTTCCAGGACAGAGATTGGTTAGCAACAGGACAGTAAGGTGCTTAACAAATGTGGAGTCATTTTCACTCTCTGCTTCAGACCTTGAAGAAGTCACAATCCTTTTCACAAGATTCTTGCGAAGTCCATGTGTTCAAGGAGCCCTAAGGTATGAGTCACCTTATTGGAGATCCCTTGCTGCGACCCGCATTCAAGTTGCATGGAGATACAGGCAGAAACGTCTATATCGTGTTAATTCCTCACTATCAGATTGA 2397 0.4093 MANFENDKRPMLSDTDAQTYDEPLDSKFRRMVTRTQSALISIPMSSLESYEKETSFVGHTGPLQSKRKTPFMHMSGPLYATNGTGNLLQKHNVSGNEAEERKKDNFATLHGTSSNYPNIDYDRKNEHLLRSGQLGMCNDPYCTTCPTYFNASEQRNPKPSARWDPKAVDSRPVVKQVYVRKKKLGKELARTKLTSRDVLLRNFHNALYGDAKSFVRKLLSFFSSYVPGVMNPHAKVVQKWNKFLAIFCLIGIFVDPLFFFLLYVEEDNKCIVINWPLTTALVLFRWLNDFVYFLNILLQFRLAYVSRESRVVGAGDLVDHPQKIALHYLKGYFLIDLFVVFPLPQIMLLFVLPNSLGGANQAKNLLRAAILVQYFPKLFRFLPLLIGQSPTGFIFESAWANFIINLLIFMLASHVVGSCWYLFGLQRVNQCLRDACRHSDIPGCMKFIDCGRGHPDFTSNQWINNTDAADCLNTSSNSFPYGIYVNAVPLTIETNAVKKYVYSLFWGFQQISTLAGNLVPSYFVWEVLFTMAIIGSGLLLFAILIGNIQNFLQALGRRKLEMQLRGRDVEQWMSHRRLPEDLRRRVRQAERYSWAATRGVNEEMLMENLPEDLQRDIRRHLFNFVKNIRLFALMDEPILDAICERLRQKTYIKGSKILSHGGLVEKMVFVVRGKLESIGEDGTKIPLSEGDACGEELLTWYLEHSSVSTDGRKVRLPGQRLVSNRTVRCLTNVESFSLSASDLEEVTILFTRFLRSPCVQGALRYESPYWRSLAATRIQVAWRYRQKRLYRVNSSLSD 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02914 798 Gene3D Helix hairpin bin 558 622 - -
Spst4g02914 798 SUPERFAMILY cAMP-binding domain-like 558 750 IPR018490 -
Spst4g02914 798 MobiDBLite consensus disorder prediction 1 20 - -
Spst4g02914 798 SUPERFAMILY Voltage-gated potassium channels 235 558 - -
Spst4g02914 798 Gene3D - 242 555 - -
Spst4g02914 798 Gene3D Jelly Rolls 628 752 IPR014710 -
Spst4g02914 798 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 206 788 - -
Spst4g02914 798 Pfam Ion transport protein 242 557 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Spst4g02914 798 ProSiteProfiles cAMP/cGMP binding motif profile. 630 698 IPR000595 -
Spst4g02914 798 CDD CAP_ED 630 746 IPR000595 -
Spst4g02914 798 SMART cnmp_10 630 765 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02914 Spst-Chr4 68759677 68773023 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02914 5 708 Ion Channels AT3G17700 57.163 0.0 786
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02914 K05391 - gmx:100795427 1376.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02914 4 68759677 68773023 Spst4g02914 4 68759677 68773023 ECH