Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02913 ATGTCTAAGACAAGCCTTTGGCATAATTGGAAGAACAATACTGTTGCAACTGCTTGTTTTAATGAAGATGGTTTTGGTGATGGTTATGGTATCTTTGTTAAAGCTGTCAACCTTACCGCACAGCATGATGTGTTCAAAAGATATATATATTCATCATTCTGGGGATTTCAGCAAATTAGCACACTGACTGGGAATTTAGTCCCTAGCTATTATGTTCCTGAAGTCATTTTTACTAAGGCCATTCTTGGATCAGGACTGCTGCTGTTTGCACTTCTCATTGGAAACATACAGAACATTCTTCAGGCTCTTGGACGCAGGAAGCTAGAGATGTCACTTAGACGACGTGATGTTGAGCAATGGATGAGCCATCGGGGCTTAGAAGACGATCTGAGAAGGAGAGTGCGACAGGCTGAACGTTATAACTGGGCTGCAACAAGGGGGGTGAATGAAGAAATGCTCCTGGAGAATTTGCCAGAAGACCTCCAAAGGGACATAAGACGTCATCTCTTTACATATATCAAGAAAGTTCAAATTTTCGCCTTGTTGGATGAACATATATTGGATGCCATTTGTGAGAGGCTAAGACCAAAAACATACATCAAAGGAAGCAAAATTTTGTATGATGGTGGTTTGGTAGAGAAGATGGTTTTTATTGTGCGTGGAAAATTGGAGAGTGTTGGCGAAGATGGAATCCGTGCTCCTCTTTATGAAGGGAGTGTCTGTGGTGAAGAACTTATGACATGGTGTCTTGAGCATCCTTTAGCAAGCAAAGGTGGTAGAAAATCAAGGATTCCAAGGCAAAAGTTGGTTAGTAACAGAACAGTATGTTGCTTAACAAATGTGGAGGCATTTTCCCTTAGAGCAGCAGACCTTGAAGAAGTTACAGGCCTATTTGCAAGATTCTTTAGGAGTCCCCGTGTTCTAGGAGCTATAAGTGATGCACCCTTTTGTGAGAATCTCCTCTGCAGTGCCCCCGTGATGAAGAAGCTCCCAAAAGAGCAATCTTTCTCTTAA 1014 0.4201 MSKTSLWHNWKNNTVATACFNEDGFGDGYGIFVKAVNLTAQHDVFKRYIYSSFWGFQQISTLTGNLVPSYYVPEVIFTKAILGSGLLLFALLIGNIQNILQALGRRKLEMSLRRRDVEQWMSHRGLEDDLRRRVRQAERYNWAATRGVNEEMLLENLPEDLQRDIRRHLFTYIKKVQIFALLDEHILDAICERLRPKTYIKGSKILYDGGLVEKMVFIVRGKLESVGEDGIRAPLYEGSVCGEELMTWCLEHPLASKGGRKSRIPRQKLVSNRTVCCLTNVEAFSLRAADLEEVTGLFARFFRSPRVLGAISDAPFCENLLCSAPVMKKLPKEQSFS 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02913 337 Gene3D Jelly Rolls 176 300 IPR014710 -
Spst4g02913 337 ProSiteProfiles cAMP/cGMP binding motif profile. 178 256 IPR000595 -
Spst4g02913 337 SUPERFAMILY cAMP-binding domain-like 106 301 IPR018490 -
Spst4g02913 337 Gene3D Helix hairpin bin 106 170 - -
Spst4g02913 337 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 10 304 - -
Spst4g02913 337 SMART cnmp_10 178 313 IPR000595 -
Spst4g02913 337 SUPERFAMILY Voltage-gated potassium channels 40 140 - -
Spst4g02913 337 CDD CAP_ED 178 294 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02913 Spst-Chr4 68753586 68758751 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02913 10 258 Ion Channels AT3G17700 70.281 2.51e-114 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02913 K05391 - gmx:100795955 508.449