Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02912 ATGGCTAGTTTTGAGGAAGATGAGATGCCAAGTCTGTCACATCCCCAACAATCAATTGAAGTTGTTGATTCTAAATTTCCAAGGCTTGTGCCTAGGACTCGAAGTGTATCAATTTCTATTCCTACGTCACTCACAGAGTCATATGAAAGAGATACTAATCTTGTGGGATACACTGGTCCACTACAGATTCAGAGAATAACTCCATATGATCAGATGAGTGGTCCATTACATATCACTAATAGACCTGGAAACCTTTTCCGACGGTATAAAGTGGCACCTGAGTCACAAGCAGAAGAAAATAAGACAGAGAATTTTTCTTCATGCTGTGACATGGGTGAAAATGATTTGCAGAACAACTATGCTGGCAAGAATGAACATTTAGTTAGGTCCGGTCCACTGGGAATGTGTAGTGATCCATATTGTACAACTTGCCCAACTTACTTCAAGGCTACTCAGCAAAGTAATTCAAAAACTTCGGGTATATTTAATCCTAAGTTTGGCAATACTCTTTATGGGGATGCGAGGGATTGGGCCAAAAGACTTTTTACTTTCTTGGTTCCCCATGTTCCTAGAGTTATGAATCCTCACAATAAACTTGTACAACAATGGAATCAATTTTTTGCAATTTGTTGCTTGGTGGCAATTGCTGTGGATCCATTATTTTTCTATTTGCTCTCTGTAAAGAAGGAAAATAAATGTATTGTTATAAACTTGGCTTTGACCAAAATACTTGTTGCACTTAGAAGCATGAATGATTTCATACACTTCCTAAATATTGTTCTTCAGTTTAGGTTGGCTTATGTGGTTCCTGAGTCTAGGGTGTTTGGTGCTGGGGAGTTAGAAGACCATCCTAAGAAAATAGCTCTTCATTACATGAAGACATCTTTTTTTGTTGACTTATTTGTTGTATTTCCACTTCCTCAGATATTCATTTTATTTGTCCTACCAAAGCACTTGGAGACAGGGTCATCAGGAGCAAACTATGCAAATAACATTTTGTGTATTGTGATCCTTGTTCAGTATATTCCCAGATTGTTTAGGTTTCTTCCTATGCTACTTTCTCCAGCTGGACTCGTATTTGAGTCTCCACAGGCCAATTTCTTTATAAATCTTTTTACCTTTATGCTATCTGGCCACATTGTTGGGTCCTGGTGGTACCTCTTTAGTTTGCAGGGTGAAGAATCTGAAATTAGTGATGGAGAGGAGGAAAAAGGGGTAAAATCTTCACCCTCAGGCAATCTGTCAGAAAGAGGTCTCACTTCCAATGAGGAGCTAGTGACTGTCCAAGTAGAACTTAAGGACATATTCAGAGTACCTACAGGCTTACCTCCCAAGAGAGCTTGTGACCATGCTATCACTCTCAAGGTTGTCATATTAAGCACCCTTAGGCAATGTGTCAGAAAGAGGTCTCACTTCCAATGA 1422 0.3924 MASFEEDEMPSLSHPQQSIEVVDSKFPRLVPRTRSVSISIPTSLTESYERDTNLVGYTGPLQIQRITPYDQMSGPLHITNRPGNLFRRYKVAPESQAEENKTENFSSCCDMGENDLQNNYAGKNEHLVRSGPLGMCSDPYCTTCPTYFKATQQSNSKTSGIFNPKFGNTLYGDARDWAKRLFTFLVPHVPRVMNPHNKLVQQWNQFFAICCLVAIAVDPLFFYLLSVKKENKCIVINLALTKILVALRSMNDFIHFLNIVLQFRLAYVVPESRVFGAGELEDHPKKIALHYMKTSFFVDLFVVFPLPQIFILFVLPKHLETGSSGANYANNILCIVILVQYIPRLFRFLPMLLSPAGLVFESPQANFFINLFTFMLSGHIVGSWWYLFSLQGEESEISDGEEEKGVKSSPSGNLSERGLTSNEELVTVQVELKDIFRVPTGLPPKRACDHAITLKVVILSTLRQCVRKRSHFQ 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02912 473 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 136 395 - -
Spst4g02912 473 Pfam Ion transport protein 202 393 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Spst4g02912 473 SUPERFAMILY Voltage-gated potassium channels 195 389 - -
Spst4g02912 473 MobiDBLite consensus disorder prediction 398 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02912 Spst-Chr4 68740380 68746160 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02912 1 391 Ion Channels AT3G17700 50.126 7.16e-127 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02912 K05391 - gmx:100795955 641.728