Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02906 ATGGAAGCTGTCATGACATATTTGGATGAACACCGATTTTCCAGCGCCAAACCTAACCCTCTTCTGTTCAACACACCGATTCTAGAGAGAGAAAGAGTGTGTTCGAGAGAAATGAATGCTTCAATGAGGAAAAAGGTTCAAAGGAAGTGTAAGATAAGAGGCTACAACCTCAAAGTGGATGCTCTCGACGAGATCCTCTCCTTCGCCGCTCGCTTCGAAGGCGACGAAGACGAAGCCGTCGATCTCCTCCTCGACGAGCTCGAAAAATCTTTGAAATCCACAATAATTGACAAGGAGACGGTGCACCGCGTGGTGAGCCTGCTGCTGGAAGCTGAGGCGGCCGTGGAGGATAGCTCCGACCCCGGCGCTGGCACCTCTTCCGCCATTCGCGTTGTCGATGCGTTCCTCGTCCCGAAATATAAATACGACACTATCAGAAAACAGTTCTACGAGCATACAGGCACGTTATCTATTCACGGAGAAGCATCAGCAAAAGCAGCTTTGTACAGGGATAGGTTTCTGTTATTGTCCCAGAGGCTCTCTCGTGACCAGCATTTTTCTAAACCTGCTTTTGAATCTGAATTTTCTCATTTCGGAAGTTGTGAGATATCTCCTATTCAATCTCTAGTTGGGCAAACAGGTAGAAGATGGGTGATGGGCGTAATATCTCAGCTGGAAGATGGTCATTACTATTTGGAAGACCTTACAGCTGCAATAACTACAGGACTCTTTTCAGAGAACACTATAGTTGTGGTCGAAGGGGAGATGCACGTGGAGGGTATTTTTCAGGTTTTAACATGTGGATTTCCTCCACTGGAGGATAGAGATAAGTCACTGAAAGTACTTGCAGGGCATGACTTTTTTGGTGGTGGTACTTTTACCAAAGAGGAAACTATTAGAATGGAAGAGATGGAGAAAAGAGCTGTAAATGACATGTTTGTCATACTTGCTGATGTTTGGCTAGACAATGAAGAGGCTTTGACAAAGCTGGAGACTGTTCTGGATGGTTTTGAGAGTGTGGAAGTGGTTCCTTCCTTATTTGTTTTCATGGGAAACTTCTGCTCTAGGCCATGTAACCTTTCATTTCATTCTTATTCGAGCCTCAGAATGCAGTTTGGTAAGCTGGGGGAAATGATTGCTGCCCATACTCGGCTGAAAGAGCTGAGTCAATTTCTGTTTATTCCAGGTCCTGATGATGCAGGTCCTTCGACGGTTCTTCCTAGGTGCGCTTTACCAAAATATTTAACTGAAGAGCTCCAAAAGCACATACCAAATGCCATATTTTCAAGCAACCCTTGCAGGGTAAAATTTTATACCCAAGAAATTGTATTTTTCCGCCAGGATATGCTGCATAGAATGCGTCGCTCATGTTTGATGTCTCCTTCTACAGAAGAGACTGATGATCATTTTCAACATCTTGTTGCTACCATAACCCATCAAAGTCATCTCTGTCCACTCCCACTTACTGTTCAACCTATCATTTGGAATTATGACCATTCTCTCTATCTTTATCCAACTCCACACACGATAGTCTTGGGTGACAGAAGTCAGCAAAAGGCATTCAAGTACACAGGAATCACCTGTTTTAATACTGGTTCCTTCTCAATTGACAGCACGTTTGTGGCATATCGTCCCTGCTCTCAGGAAGTAGAATTATCAGCCTTATATACAACCATTAACAAAGCTGGAAATCTGGAATTGCTGCCTTTTCCTCTTGGGAATATTGAAAACAGCCAGAATCCAATGACCATTGCCAGTGGTAAAACGCTCCACACAAGCACAGCTGCAATGAAAGGTGATGTTGATATAGCCACAAGTTGA 1821 0.4404 MEAVMTYLDEHRFSSAKPNPLLFNTPILERERVCSREMNASMRKKVQRKCKIRGYNLKVDALDEILSFAARFEGDEDEAVDLLLDELEKSLKSTIIDKETVHRVVSLLLEAEAAVEDSSDPGAGTSSAIRVVDAFLVPKYKYDTIRKQFYEHTGTLSIHGEASAKAALYRDRFLLLSQRLSRDQHFSKPAFESEFSHFGSCEISPIQSLVGQTGRRWVMGVISQLEDGHYYLEDLTAAITTGLFSENTIVVVEGEMHVEGIFQVLTCGFPPLEDRDKSLKVLAGHDFFGGGTFTKEETIRMEEMEKRAVNDMFVILADVWLDNEEALTKLETVLDGFESVEVVPSLFVFMGNFCSRPCNLSFHSYSSLRMQFGKLGEMIAAHTRLKELSQFLFIPGPDDAGPSTVLPRCALPKYLTEELQKHIPNAIFSSNPCRVKFYTQEIVFFRQDMLHRMRRSCLMSPSTEETDDHFQHLVATITHQSHLCPLPLTVQPIIWNYDHSLYLYPTPHTIVLGDRSQQKAFKYTGITCFNTGSFSIDSTFVAYRPCSQEVELSALYTTINKAGNLELLPFPLGNIENSQNPMTIASGKTLHTSTAAMKGDVDIATS 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02906 606 Gene3D - 38 106 - -
Spst4g02906 606 Pfam DNA polymerase alpha/epsilon subunit B 313 518 IPR007185 GO:0003677|GO:0006260
Spst4g02906 606 PANTHER DNA POLYMERASE EPSILON SUBUNIT B 38 555 IPR016266 GO:0003677|GO:0006261|GO:0008622
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02906 Spst-Chr4 68703348 68714469 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02906 53 512 Core DNA Replication Machinery Family AT5G22110 69.362 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02906 K02325 - gmx:100784116 893.649