Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02882 ATGGATGGTGATAATGGTCTTAACATCCGTAATTGGGGTTACTATGAACCCGCCACGTCGTTTAAGAGCCACCTGGGGCTGCAGCTGATGTCATCCATGCCAGAAAAGCCTTTAATAGGAGGGCGTAATGCTTCGGTTTTATCTGGAAGTAATGGGGCATTTCACCATAGGGACATTGGTATGCCCCAAGCTTCATACCCTATGGAGTACATGAGGGATGCTTGGATTAGTAGTCAGAGAGATAAGTATATGAATATGATACCTACAAATCATAACTATGGTGGTCTTCCAGAGACTTCTTCAGCACATCAAATTCAAATGATTCCACCACCGGAATTGCCAAAGGAAGAAAGGCCAGTGGAAGAGGAACCTGTTGTTGAGAAGGCAACTGGTGGCGCTCGTAAGAAAAGACAGGGTCCCAAAGTACCCAAATCTCCCAAGGCTAAGAAGTCCAAGAGGGGGCCTCGTGTGCCAAAGAATGAGAATGCTCCCACAGTTCAACGCACCAGGGTTCCAAAGAAAACTACTGAAATTGTAATAAATGGAATTGACATGGACATTTCTAGTATTCCAATTCCTGTTTGTTCATGCACTGGAGCATCTCAACAGTGTTACAGATGGGGCTCTGGTGGTTGGCAGTCTGCATGTTGCACAACAGGAATGTCAGTGTATCCTTTGCCTATGAGTACCAAGCGGCGTGGTGCTAGGATAGCTGGAAGGAAAATGAGTATAGGAGCATTTAAAAAAGTTTTAGAGAAACTTGCAGCCGAGGGTTATAACTTTTCTAATCCAATTGATTTGAGGACTTATTGGGCAAAACATGGCACCAACAAGTTTGTCACTATTAGGTAG 852 0.4437 MDGDNGLNIRNWGYYEPATSFKSHLGLQLMSSMPEKPLIGGRNASVLSGSNGAFHHRDIGMPQASYPMEYMRDAWISSQRDKYMNMIPTNHNYGGLPETSSAHQIQMIPPPELPKEERPVEEEPVVEKATGGARKKRQGPKVPKSPKAKKSKRGPRVPKNENAPTVQRTRVPKKTTEIVINGIDMDISSIPIPVCSCTGASQQCYRWGSGGWQSACCTTGMSVYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLRTYWAKHGTNKFVTIR 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02882 283 PANTHER - 1 283 IPR010409 -
Spst4g02882 283 SMART GAGA_bind_2 1 283 IPR010409 -
Spst4g02882 283 MobiDBLite consensus disorder prediction 135 154 - -
Spst4g02882 283 Pfam GAGA binding protein-like family 1 283 IPR010409 -
Spst4g02882 283 MobiDBLite consensus disorder prediction 114 134 - -
Spst4g02882 283 MobiDBLite consensus disorder prediction 109 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02882 Spst-Chr4 68511809 68512660 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02882 1 283 BBR or BPC Transcription factor family AT2G01930 52.703 2.81e-96 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Spst4g02882 GAGA_bind 4.9e-110 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02882 - - gmx:100784091 509.99