Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02881 ATGGATGGTGATAATGGTCTTAACATCCGTAATTGGGGTTATTATGAGCCGGCCACATCGTTTAAGAGCCACCTTGGGCTGCAGCTGATGTCATCCATGCCGGAAAAGCCTATAATAGGAGGGCGCAATGCTGCGGTCTTATCTGCCACTAATGGGGCATTTCACCATAGGGACATTGGTATGCCCCAAGCTCCATACCCTATGGAGTACATGAGGGATGCTTGGATTAGTAGTCAGAGAGACAAGTATATGAATATGATACCTACTAATCATAACTACGGTGGTATTCCAGAGACATCTTCAGCACATCAAATTCAAATGATTCAAGCGCCGACATTGCCGAAGGAAGAAAAGCCAGTGGAAGAAGCTCCTGTTGTTGAGAAGGCAAATGGAACTCGTAAGAAGAGACAGGGACCAAAGGTTCCCAAATCTCCCAAGGCTAAGAAGCCAAAGAGGGGCCCTCGTGTGCCAAAGGATGAGAATGCTCCCTCAGTTCAACGTTCAAGGGTTTCAAAGAAAACTACTGAAATCGTAATAAATGGGATTGATATGGATATTTCTAGTATTCCGATTCCTGTTTGTTCATGCACTGGAGCACCTCAACAATGTTACAGATGGGGCTCTGGTGGTTGGCAGTCTGCATGTTGCACAACAGGAATGTCAGTGTATCCCTTGCCTATGAGTACGAAGCGGCGTGGTGCTAGGATAGCAGGAAGGAAAATGAGTATAGGAGCATTTAAGAAAGTTTTAGAGAAACTTGCAGCCGAGGGTTATAACTTTTCTAATCCGATTGATTTGAGGACTTATTGGGCAAAACATGGCACCAACAAGTTTGTCACTATCAGGTAG 849 0.4499 MDGDNGLNIRNWGYYEPATSFKSHLGLQLMSSMPEKPIIGGRNAAVLSATNGAFHHRDIGMPQAPYPMEYMRDAWISSQRDKYMNMIPTNHNYGGIPETSSAHQIQMIQAPTLPKEEKPVEEAPVVEKANGTRKKRQGPKVPKSPKAKKPKRGPRVPKDENAPSVQRSRVSKKTTEIVINGIDMDISSIPIPVCSCTGAPQQCYRWGSGGWQSACCTTGMSVYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLRTYWAKHGTNKFVTIR 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02881 282 MobiDBLite consensus disorder prediction 115 134 - -
Spst4g02881 282 MobiDBLite consensus disorder prediction 111 172 - -
Spst4g02881 282 Pfam GAGA binding protein-like family 1 282 IPR010409 -
Spst4g02881 282 MobiDBLite consensus disorder prediction 135 152 - -
Spst4g02881 282 PANTHER - 1 282 IPR010409 -
Spst4g02881 282 SMART GAGA_bind_2 1 282 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02881 Spst-Chr4 68506869 68507717 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02881 1 282 BBR or BPC Transcription factor family AT2G01930 51.351 4.06e-97 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Spst4g02881 GAGA_bind 1.3e-111 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02881 - - gmx:606296 514.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02881 4 68506869 68507717 Spst4g02881 4 68506869 68507717 ECH