Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02873 ATGCCCCAGAATAAGATTTTCGGAGACCAATCATCGAATCCGATTCCTGATCTTTCCCTTCACATTAGCCTCCCGAACAGTGCTCCTTCTTCTATTTGCACTGGAGGGGATTCACCCTTTGATACATGCCCACAACAAGCAGATGATGATTATGATGCTGAAGGCCTAAAGTCTCACAGTGATGGTTCAATCAGAGGTTGTAGCCCTTACCACGCAGACACACAACTCTCCTTGGCCAACCCAACAGGTGGTGTCACTACTACTCCCTCAGAGGCTGAAATTACCTGGAGAAAAAGAAACCATGTAAGACTTTGTCATCATGGGGTTACTGATGGTCAAATAAGACTCATCAATGGAATCCCTCTCTACAGTAACCTTTCTTTGGACAACAGTAGTACTGTTCCCTCAATAGAGAGAAACCCCACCAACAAGTTTTCCTTTTCTTCTCTATGTGCTGTTCCACATCCTCCCTATTCTGCCAATTCGGCTCCTAATTATAGTAGTAATGGTGTTGTTGGGGGTGTAGCAGGAGAACCAATCTCAAGGTTTCATGACATAACCATGGAGAGTACTCCAAGGTCCCAACAGTTTCAGTACCTTGATTACCCTCAGCAGCAGCAGCAGCAGTTTGGGAATAGTACTAATTTTGGAGCTTCTGAATTTTCCAATGGATTTGTGAGGTCAAGAATGCTGTCAAGGCAACAAAGTAATAAGAGGAACATGAGAGCTCCAAGAATGCGTTGGACTAGTTCTCTTCATAATCGATTTGTCCATGCTGTTGAACTACTTGGTGGTCATGAAAGGGCTACTCCTAAGTCAGTTTTGGAACTAATGGATGTCAAAGATCTAACACTAGCTCATGTCAAGAGCCATTTGCAGATGTATCGGACTGTTAAGAACACTGACAAACCTGCAGCTACTTCAGATGGGGATGAGGATTTCATGTCCCTAACAGTACCAAATAATCAAAATAAGAATTTTTTACCAAATCAGAGAGGACCTCCAAATGCATCCATGGATCAAGATATGGGCTACACTTCCAGCAATCTAATATGGGCTAATTCTTCTTCCAGTAGAGGAGAACGGATACAAGCTAATTCCCGTGATTTGGAAGAGCTTAGTCCACAAGAAATCCTGTCATCTCAGTATTCTGGGAAACTTTCTGAGGGAAACAACTACATACAAACAAGAAGCTTCAAGGATCAAAATCCAAGCTTGGAGTTCACCTTAGGGAGATCAACTTGGCACAGCAATGAACATGCCTAA 1266 0.4297 MPQNKIFGDQSSNPIPDLSLHISLPNSAPSSICTGGDSPFDTCPQQADDDYDAEGLKSHSDGSIRGCSPYHADTQLSLANPTGGVTTTPSEAEITWRKRNHVRLCHHGVTDGQIRLINGIPLYSNLSLDNSSTVPSIERNPTNKFSFSSLCAVPHPPYSANSAPNYSSNGVVGGVAGEPISRFHDITMESTPRSQQFQYLDYPQQQQQQFGNSTNFGASEFSNGFVRSRMLSRQQSNKRNMRAPRMRWTSSLHNRFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKNTDKPAATSDGDEDFMSLTVPNNQNKNFLPNQRGPPNASMDQDMGYTSSNLIWANSSSSRGERIQANSRDLEELSPQEILSSQYSGKLSEGNNYIQTRSFKDQNPSLEFTLGRSTWHSNEHA 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02873 421 Gene3D - 243 300 - -
Spst4g02873 421 FunFam Myb family transcription factor 242 300 - -
Spst4g02873 421 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 16 420 IPR044847 GO:0000976|GO:0006355|GO:0010158
Spst4g02873 421 MobiDBLite consensus disorder prediction 320 343 - -
Spst4g02873 421 Pfam Myb-like DNA-binding domain 245 296 IPR001005 -
Spst4g02873 421 MobiDBLite consensus disorder prediction 356 376 - -
Spst4g02873 421 SUPERFAMILY Homeodomain-like 241 298 IPR009057 -
Spst4g02873 421 MobiDBLite consensus disorder prediction 31 64 - -
Spst4g02873 421 NCBIfam myb-like DNA-binding domain, SHAQKYF class 244 297 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02873 Spst-Chr4 68432550 68439670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02873 224 416 G2-like Transcription Factor Family AT5G16560 50.000 1.59e-47 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Spst4g02873 Myb_DNA-binding 1.2e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02873 - - gmx:100796973 605.905