Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02860 ATGGCGCTTATCCGCCACCGACGCCACCCCAATCTCCGCCTCTCCGTCTTGGAGCCCTCCGAGCGCAACCGCAACTTTTCGCTTTCCTTCTGTCGAAGCTCTCCCACCACCATCAAACCCGCCGCCGAGGATGTCATCACCGCCGCTGACCTCGAGAACCTCGCAGTGCTCGGTCACGGCAATGGCGGTACCGTCTACAAGGTCCGCCACAAAACTACCTTGGTCACGTACGCTCTTAAAGTAATCCACAGCAACGCAGACGCCACCACACGCCGCCGCGCATTGTCAGAAATCTCCATTCTCCGACGCGCCACAGATAGTCCCCATGTCGTGGGCTTCCACGGCTCCTTCGAAAAGCCCTCCGGCGACTTAGCCATCGTCATGGAATACATGGACGGCGGAAGTCTCGAGACCGCTCTTGCGGATGGCACATTTTCTGAAGAACGCCTCAAAGTGGTGGCGCGTGACATTCTGGAAGGTCTAGCTTCCCTTCATGAGCGACACATCACGCACCGTGACATCAAACCTGCGAATATCCTCTTAGATTCGAAGGGAGAGATTAAAATTGCAGACTTTGGTGTTAGCAAACTCATGTGTCGCACACTCGAAGCATGTAACTCTTACGTTGGCACGTGCGCGTACATGAGTCCAGAACGGTTTGACCCAGAAGCACACGGAGGGAACTATAACGGTTTTGCCGCCGATATTTGGAGTTTCGGTTTGACCCTTTTCGAACTCTACGTGGGTCACTTCCCATTTCTTGAAGCGGGTCAGCGACCCGATTGGGCTACCCTTATGTGTGCCATTTGCTATGGTGACCCGCCGAGCCTACCGGAGTCAGCATCGCCGAAGTTTCGCAGCTTCATCGAGTCCTGTCTCAAGAAGGAGTCTCAAGATAGGTGGACGGCTGCCCAACTCTTGACCCACCCTTTTGTAAGTAAAGACCCGGAAACTCACTAA 960 0.5469 MALIRHRRHPNLRLSVLEPSERNRNFSLSFCRSSPTTIKPAAEDVITAADLENLAVLGHGNGGTVYKVRHKTTLVTYALKVIHSNADATTRRRALSEISILRRATDSPHVVGFHGSFEKPSGDLAIVMEYMDGGSLETALADGTFSEERLKVVARDILEGLASLHERHITHRDIKPANILLDSKGEIKIADFGVSKLMCRTLEACNSYVGTCAYMSPERFDPEAHGGNYNGFAADIWSFGLTLFELYVGHFPFLEAGQRPDWATLMCAICYGDPPSLPESASPKFRSFIESCLKKESQDRWTAAQLLTHPFVSKDPETH 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02860 319 ProSiteProfiles Protein kinase domain profile. 51 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02860 319 Gene3D Transferase(Phosphotransferase) domain 1 132 319 - -
Spst4g02860 319 Pfam Protein kinase domain 53 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02860 319 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 44 314 - -
Spst4g02860 319 ProSitePatterns Protein kinases ATP-binding region signature. 57 80 IPR017441 GO:0005524
Spst4g02860 319 SMART serkin_6 51 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02860 319 FunFam Dual specificity mitogen-activated protein kinase kinase 35 131 - -
Spst4g02860 319 FunFam Mitogen-activated protein kinase 2 133 319 - -
Spst4g02860 319 Gene3D Phosphorylase Kinase; domain 1 27 131 - -
Spst4g02860 319 CDD PKc_MAPKK_plant_like 49 314 - -
Spst4g02860 319 SUPERFAMILY Protein kinase-like (PK-like) 50 314 IPR011009 -
Spst4g02860 319 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02860 Spst-Chr4 68361272 68362231 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02860 1 315 MAP Kinase Kinase Gene Family AT1G73500 58.228 1.18e-121 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Spst4g02860 Pkinase 1.3e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02860 K20604 - gmx:100804100 523.472