Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02855 ATGGAATCTGAGAGGCCTAACACTACTATTGAGACCTACAAACAACAACAAGAACTAGAAGAAGAAGATGACGACGATGAAGAAGAAGAAGAAAACAATGAGATCCTCAAGAGAAGAATTTCCAGCCACCCTCTCTATGGACTGCTGGTTGAAACTCACTTGGACTGTTTGAAGGTTGGTGACATTTCTAACTTGGAGAGAGAGCTGAAGATAGATCAGATGCAAGCAACGGAGAAGCAAAACTTGGGCATGTTCAGCCAATCTGAGCTTGATCTCTTCATGGAAGCATATTGCTTGGCACTTGGGAAGCTGAAAGAAGCAATGGTGGAACCACAACAGAAGTCCATGGCTTTCATAAACAACATGCATTCACAACTTAGGGAGATGACTAAGCCAACCTTGCCTGCACCACCTCCTGAACCTGCACCACCTCCTGCATCTTCTAGTGACTGCAACTTCAGAAGAAATTAG 471 0.4416 MESERPNTTIETYKQQQELEEEDDDDEEEEENNEILKRRISSHPLYGLLVETHLDCLKVGDISNLERELKIDQMQATEKQNLGMFSQSELDLFMEAYCLALGKLKEAMVEPQQKSMAFINNMHSQLREMTKPTLPAPPPEPAPPPASSSDCNFRRN 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02855 156 MobiDBLite consensus disorder prediction 132 146 - -
Spst4g02855 156 MobiDBLite consensus disorder prediction 17 31 - -
Spst4g02855 156 Coils Coil 10 39 - -
Spst4g02855 156 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 15 131 - -
Spst4g02855 156 MobiDBLite consensus disorder prediction 1 34 - -
Spst4g02855 156 SMART KNOX1_2 34 80 IPR005540 GO:0003677|GO:0005634
Spst4g02855 156 MobiDBLite consensus disorder prediction 128 156 - -
Spst4g02855 156 Pfam KNOX2 domain 88 130 IPR005541 GO:0003677|GO:0005634
Spst4g02855 156 Pfam KNOX1 domain 36 60 IPR005540 GO:0003677|GO:0005634
Spst4g02855 156 Coils Coil 62 82 - -
Spst4g02855 156 SMART KNOX2_2 80 131 IPR005541 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02855 Spst-Chr4 68283713 68286465 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02855 34 126 Homeobox Transcription Factor Family AT4G08150 37.000 5.84e-12 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02855 - - gmx:100805160 214.157