Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02847 ATGTGTATGTGTTACAGAGCAAGCTGCTGCTGCATATGCTCCACAATCTCCATCATTGTGATCTTCTTCATACTTCCTTTGATCATTGTCCCGATAATCACAGCACCTAAAAGTGTCAAGTTCCGAGTAACTGATGTCTTTCTAACACAGTTCAACCTCACAAGAAACAACACCTTGTATTACAACTTCAAGGTCAACGTCACAGTGACAAACCCTAACAACAAGGTCACAGTGTACTATAGGAAGATCACAGCAATAGCTTGGTACAAAGATAATGCTTTTGTTCTGGTGAGTTTAACACCCTTTGACCAAGTCCACAAGAACACCACCTTCCTTCAAGCAGTGTTTGTAGGGCAAAGGGTGATCAAGCTCAAATCTAAACAGCTTGGTGAGTATGAAGAAGAGACAAGCGTTGGGATTCACAGGGACTTGGCTGTGGATTTTGAGCTTATAGTCAGAGCCAGTTGA 468 0.4231 MCMCYRASCCCICSTISIIVIFFILPLIIVPIITAPKSVKFRVTDVFLTQFNLTRNNTLYYNFKVNVTVTNPNNKVTVYYRKITAIAWYKDNAFVLVSLTPFDQVHKNTTFLQAVFVGQRVIKLKSKQLGEYEEETSVGIHRDLAVDFELIVRAS 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02847 155 PANTHER OS05G0367900 PROTEIN 5 150 IPR044839 GO:0098542
Spst4g02847 155 Pfam Late embryogenesis abundant protein 66 138 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02847 Spst-Chr4 68181692 68182159 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02847 38 152 SNARE and Associated Proteins AT1G32270 30.508 5.50e-16 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02847 - - gmx:100784278 194.126