Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02845 ATGCAACATTCTCACACACTTTTTCCCACCATTCTCCTTCTCTTTTTCTTCTTTCCTTCAACACTCTCCGACCTCTCGTCGGAGCGCGCGGCGCTCCTCGCCCTGCGCTCCGCCGTGCGCGGCCGCACGCTTCTTTGGAACGCTGCCTTCTCCTCGCCCTGCGCCTGGCCCGGGGTCCAATGCGACGCTGCCAACGTCACGGTGGTGGAGCTCCACCTCCCCGCCGTCGCTCTCTCCGGAGAGCTTCCCGCCGGCGTGTTCCCGGCGTTCCCCAACCTCCACACTCTGAGTCTTCGCGTGAACTCCCTCTCTGGCGCTCTCCCCGCCGACCTCGCCGCCTGCGCCGCCCTCCGGAACCTCTTCCTCCAGCAGAACCACTTCTCTGGCGAGGTGCCGGCGTTTCTTTCCGGTATGACCGGCCTCGTCCGGCTCAATTTGGCCTCCAACAACTTTTCCGGCCCAATTCCGGCCCGGTTCGGGAATCTCACCCGGTTGAGGACCCTTTTCCTTGAGAATAACCGGCTCACTGGTTCGCTACCCGGTTTGGAAGAACTCGATGAATTGGCTCAGTTTAATGTCTCTTACAACATGTTAAACGGTTCTGTTCCTAAAAAGTTGCAAACTTTTGATAAAGAATCGTTTATGGGCAATACCCTTTGTGGGAAGCCACTTGGGATTTGTCCTTGGGATGATGGGGGTGGTGAGAGTGGTGTAAATGGGAGTTCAAGTTCAAGTGGGGTTGGAGGGGGTGGAGGGAGTGTGATTGGTGGGGAAAAGAAGAAGGGAAAGCTTTCTGGGGGTGCAATTGCTGGGATTGTTGTTGGGTGTGTGGTGGCTCTTTTGTTGGTTGCGTTTACTTTGATTCTTTTCTGTAGAAGTGGAAACAAGACTAGGAGTGTTGATAATGTTAGTAACTTGGTGGCCTTGAAGGAGGAGCCTCAACAGCATGGGGAGGTGGGAATTGAGGGTGGTAATGTGGAAAATGGTGGTGGGGGTGGGAATTCGGCGGTGGTGGCGACAGCGGTGGCGGCAGTGAGTGGGAAAGGAGTTGGTGGTGGAAGTGTTGGAGATAAGAAGTTGGTGTTTTATGGTAGTAAGGTGAAAGTGTTTGATTTGGAGGATTTGCTTAGGGCTTCTGCTGAGGTGTTGGGAAAAGGAACTTTTGGGACTACCTATAAGGCTGTTTTAGAGGATGGGCCCGTGGTGGCTGTGAAGAGGTTGAGGGATGTGACCGTTTCAGAGAAGGAGTTTAAGGAGAAGATTGATGCAGTGGGAGTGATGGATCATGAGAATTTGGTGCCTCTCAGGGCTTACTATTATAGCAGGGATGAGAAGCTTCTTGTCCATGATTACATGCCAATGGGAAGCCTATCTGCAATTTTGCATGGAAACAAAGGAGCTGGTAGAACACCATTGAATTGGGAAATGAGATCAGTCATTGCAATAGGAGCTGCTCGTGGCATCGAGTACCTACATTCACAAGGGCCTAATGTTTCTCATGGAAACATAAAGTCCTCCAACATCCTCCTAACCAAGTCCTATGATGCCAGGGTGTCTGATTTTGGCCTTGCATACCTTGTTGGTCCCTCATCCACACCCAACAGGGTGGCCGGCTACCGTGCCCCCGAAGTAACCGATCCACGCAGAGTGTCTCAGAAGGCTGATGTATACAGCTTTGGGGTGTTGCTCTTGGAACTTCTGACTGGAAAGGCTCCTACACATGCCCTCTTGAATGAGGAAGGAGTGGACCTTCCAAGATGGGTGCAATCAGTGGTCAGAGAAGAGTGGAGTTCTGAGGTGTTTGATATTGAGCTCCTTAGGTATCAGAATTCTGAAGAGGAGATGGTTCAGTTGTTGCAAGTTGCAGTGGATTGTGTAGTTCCATACCCTGATAACCGCCCTTCAATATCTCAAGTGAGACAACGCATAGAAGAGTTACGTAGGTCTAGCATGAAAGAGGGTACTCAAGACCAAATCCAACAGCCTGATTTGATCGACATTGTAGATGATGTATCCTCTAGATGA 2025 0.5146 MQHSHTLFPTILLLFFFFPSTLSDLSSERAALLALRSAVRGRTLLWNAAFSSPCAWPGVQCDAANVTVVELHLPAVALSGELPAGVFPAFPNLHTLSLRVNSLSGALPADLAACAALRNLFLQQNHFSGEVPAFLSGMTGLVRLNLASNNFSGPIPARFGNLTRLRTLFLENNRLTGSLPGLEELDELAQFNVSYNMLNGSVPKKLQTFDKESFMGNTLCGKPLGICPWDDGGGESGVNGSSSSSGVGGGGGSVIGGEKKKGKLSGGAIAGIVVGCVVALLLVAFTLILFCRSGNKTRSVDNVSNLVALKEEPQQHGEVGIEGGNVENGGGGGNSAVVATAVAAVSGKGVGGGSVGDKKLVFYGSKVKVFDLEDLLRASAEVLGKGTFGTTYKAVLEDGPVVAVKRLRDVTVSEKEFKEKIDAVGVMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSAILHGNKGAGRTPLNWEMRSVIAIGAARGIEYLHSQGPNVSHGNIKSSNILLTKSYDARVSDFGLAYLVGPSSTPNRVAGYRAPEVTDPRRVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSVVREEWSSEVFDIELLRYQNSEEEMVQLLQVAVDCVVPYPDNRPSISQVRQRIEELRRSSMKEGTQDQIQQPDLIDIVDDVSSR 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02845 674 PANTHER OS05G0588300 PROTEIN 10 650 - -
Spst4g02845 674 Gene3D Phosphorylase Kinase; domain 1 355 451 - -
Spst4g02845 674 Gene3D Ribonuclease Inhibitor 25 180 IPR032675 -
Spst4g02845 674 ProSiteProfiles Leucine-rich repeat profile. 164 186 IPR001611 GO:0005515
Spst4g02845 674 FunFam Probable inactive receptor kinase RLK902 25 183 - -
Spst4g02845 674 FunFam Probable inactive receptor kinase At1g48480 452 654 - -
Spst4g02845 674 FunFam pollen receptor-like kinase 1 347 451 - -
Spst4g02845 674 Pfam Leucine rich repeat N-terminal domain 26 62 IPR013210 -
Spst4g02845 674 Pfam Protein kinase domain 380 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02845 674 SUPERFAMILY Protein kinase-like (PK-like) 381 643 IPR011009 -
Spst4g02845 674 CDD STKc_IRAK 383 646 - -
Spst4g02845 674 ProSitePatterns Protein kinases ATP-binding region signature. 383 405 IPR017441 GO:0005524
Spst4g02845 674 Gene3D Transferase(Phosphotransferase) domain 1 452 671 - -
Spst4g02845 674 ProSiteProfiles Protein kinase domain profile. 377 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02845 674 SUPERFAMILY L domain-like 46 207 - -
Spst4g02845 674 MobiDBLite consensus disorder prediction 650 674 - -
Spst4g02845 674 Gene3D Ribonuclease Inhibitor 181 228 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02845 Spst-Chr4 68165360 68167894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02845 24 663 Receptor kinase-like Gene Family AT1G48480 58.669 0.0 721
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Spst4g02845 Pkinase 1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02845 - - vum:124840126 1042.72