Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02843 ATGGAGAGTGGATTTTTTGGCTTCAGTTCCAAAAATGGTGCATGGACTACTATGAGAGATGATGCTGCAAATAAACCAAAAGACCCAGTGGGGAGTTCAGGCATGCAGTGGTCATTTCCAAACAAGGTCTCAGTCCTTCCTCAGTTCCTGTCCTTCAAGACCAATCAGGAAGACAGGCCTAGAAAGACTATTCTTGATCCACTAGCTTCATCTGGAATTATGAACATGCCAACTAAAGAGGCTTTTGAGTCTAACCAGAAACCATTATTGGGTGTGGCCCAGAGAAATATGTCCATAGCCAAGCATGGTGCAGGAAACAAACAGGGAGTGGCAGTTTATCCCATGCAATGTTGTGATGCACAATCGGCATGTCTTCAGGAAGCAAGAATATTTTCAGTTTCCAACCAAGCAAGAATATGTTCAGTCATAAAACCACAACCTCTTGGTTCCAAACCCTCTGGCACACCTCTATCTGTTCTTCCATTAAGAGGTTCCATTGTTGGATCCACTGACTTAAGGTACTATAAGAGTAGTTCCAAATCCCCTGGCATGGCTACTCAGCTGACCATTTTCTATGCTGGTTCCGTATGTGTTTATGATGACATAACTCCGGAGAAGGCCAAGGCTATCATGTTAATGGCCGGAAATGGGTATACTCCAACTCAGAAAATGGCAGTTTCCACAGCTAAATTGCAGCCATCAGTTTCTATTCCCTCCAAAGATGATGGTTTCATTATGAGCCAATGCTATCATCCCTCAGCCCTCCCAAGCCCTCTCCCATTGACCTCTCATGTCAATTCTCAGCCAGGAGGAGGATCTTCTAGCAACAATGAACTTGCCATAATAAGACCAGTAGTAGGACCTTCAACTGCCCCTACTAATCATTTGGAGTCACCTATTATTGTTGGTTCTGTAGGATCTTCATCTAAGGGAAAGGCTCAACCAGTATGCTTGCCTCAGGCACGTAAAGCATCCTTGACTCGGTTTTTGGAGAAGAGAAAGGAAAGGATGATGAGCACATCACCATACTTTTATATGAGCAAGAAATCACCTGAATGCAGCTCATCTGGATCAGACAGTGTTAGTTTCTCCTTGAACTTCTCCGGATCCTGTTCTCTACTAGCCTCCAACTAG 1134 0.4418 MESGFFGFSSKNGAWTTMRDDAANKPKDPVGSSGMQWSFPNKVSVLPQFLSFKTNQEDRPRKTILDPLASSGIMNMPTKEAFESNQKPLLGVAQRNMSIAKHGAGNKQGVAVYPMQCCDAQSACLQEARIFSVSNQARICSVIKPQPLGSKPSGTPLSVLPLRGSIVGSTDLRYYKSSSKSPGMATQLTIFYAGSVCVYDDITPEKAKAIMLMAGNGYTPTQKMAVSTAKLQPSVSIPSKDDGFIMSQCYHPSALPSPLPLTSHVNSQPGGGSSSNNELAIIRPVVGPSTAPTNHLESPIIVGSVGSSSKGKAQPVCLPQARKASLTRFLEKRKERMMSTSPYFYMSKKSPECSSSGSDSVSFSLNFSGSCSLLASN 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02843 377 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 122 355 IPR040390 -
Spst4g02843 377 Pfam tify domain 185 215 IPR010399 -
Spst4g02843 377 ProSiteProfiles Tify domain profile. 181 216 IPR010399 -
Spst4g02843 377 Pfam Jas motif 319 343 IPR018467 -
Spst4g02843 377 SMART tify_2 181 216 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02843 Spst-Chr4 68139628 68144769 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02843 35 361 Tify Gene Family AT3G17860 37.243 1.18e-42 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Spst4g02843 tify 8.8e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02843 K13464 - gmx:100807288 515.768