Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02827 ATGCAAAAGGATAGGCTAGAGAGTCATGACTTAAGGCAAAAGTTTATCAACATTGTGTTAATGGGAACACCAGAGGCAGAGTTTTTTACTGAGTATGGAGAGGCGAGTAGGTATGACATCCTAGAAGTGATTGGAAAAGGGAGTTACGGTGTTGTGTGTTCTGCTGTTGACACTCATACTGGGGAAAAAGTTGCAATTAAGAAAATCAATGATGTTTTTGAGCATGTGTCTGATGCCACACGGATCTTAAGAGAAATCAAACTCCTTCGATTGCTTCGACACCCTGATATAGTTGAAATTAAGCATATAATGCTTCCTCCCTCACGACGAGAGTTCAGGGATGTCTATGTTGTGTTTGAGTTGATGGAGTCTGATCTTCATCAAGTGATTAAGGCAAATGATGATCTTAGCCCTGAGCACTATCAATTTTTCTTGTACCAACTTCTTAGAGGCCTGAAATTTATACACACAGCAAATGTGTTTCATCGTGATTTAAAGCCAAAAAATATTCTAGCTAATGCTGATTGCAAACTAAAAATATGTGATTTCGGACTTGCTCGAGTTTCATTTAATGAGGCTCCATCAGCTATATTCTGGACAGACTATGTTGCAACCCGGTGGTATCGTGCACCTGAACTATGTGGTTCTTTTTTCTCAAAATATACCCCCGCAATTGATATTTGGAGCATTGGATGCATATTTGCAGAAATGCTCAGTGGGAAGCCATTGTTTCCTGGAAAAAATGTGGTGCACCAATTGGATCTCATAACTGACCTGCTTGGTACTCCTCCTGCTGAAACCATTGCTAAGATTCGAAATGAGAAGGCTAGAAGGTACCTTGGTAGCATGAGGAAAAAACAACCTATTCCATTCACCAAAAAATTTCCAAATGTAAATCCATTGGGTCTTCATTTGCTGGAGCGATTACTTTCATTTGATCCTAAAGATCGTCCAGCAGCTGAAGAGGCACTAACTGATCCTTATTTCCATGGTTTGTCAAATGCGGACCGTGAACCGTCCACTCAACCCATTTCAAAGCTCGAGTTTGAGTTTGAGAGGAGAAAATTGACCAAAGATGACGTTAGAGAGTTGATTTATAGAGAGATTCTAGAGTATCATCCTCAGATGCTCCAGGAATATCTTCGCGGTGGAGAACAAACAAGCTTCATGTATCCAAGTGGAGTTGATCGATTCAAGCGACAGTTTGCACATCTTGAGGATTCTGGCAAAGGTGAACGAGGCACTCCATTGTTGAGGCACCATGCCTCCTTACCTAGAGAGCGAGTTCCTGATCCCAAGGATGAAAATAATCAAAACGATGATGTTGAAAATTCAACTGGAGTAATTGATTCGATGGATTCTGGAAATCCAGAAGCACAAAATGGACCCTCCAGGCCAAACTGCAGCGCACGTAGCCTGTTGAAGAGTGCCAGCATTAGTGGTTCAAAATGTGTAGATGTGAAAAAAAAACAAGATCCAGAGGAGGAGCCACATACAGAGGTCACTGAAGAGGATCTGGATGAGTTGACACAGAAGGTTGCTTCCCTCCATGCTTAG 1557 0.4168 MQKDRLESHDLRQKFINIVLMGTPEAEFFTEYGEASRYDILEVIGKGSYGVVCSAVDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFRDVYVVFELMESDLHQVIKANDDLSPEHYQFFLYQLLRGLKFIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNEAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLSGKPLFPGKNVVHQLDLITDLLGTPPAETIAKIRNEKARRYLGSMRKKQPIPFTKKFPNVNPLGLHLLERLLSFDPKDRPAAEEALTDPYFHGLSNADREPSTQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLQEYLRGGEQTSFMYPSGVDRFKRQFAHLEDSGKGERGTPLLRHHASLPRERVPDPKDENNQNDDVENSTGVIDSMDSGNPEAQNGPSRPNCSARSLLKSASISGSKCVDVKKKQDPEEEPHTEVTEEDLDELTQKVASLHA 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02827 518 Gene3D Transferase(Phosphotransferase) domain 1 124 352 - -
Spst4g02827 518 FunFam Mitogen-activated protein kinase 124 352 - -
Spst4g02827 518 Gene3D Phosphorylase Kinase; domain 1 53 375 - -
Spst4g02827 518 ProSitePatterns MAP kinase signature. 73 176 IPR003527 GO:0004707|GO:0005524|GO:0006468
Spst4g02827 518 MobiDBLite consensus disorder prediction 441 479 - -
Spst4g02827 518 ProSitePatterns Protein kinases ATP-binding region signature. 44 68 IPR017441 GO:0005524
Spst4g02827 518 ProSiteProfiles Protein kinase domain profile. 38 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02827 518 SUPERFAMILY Protein kinase-like (PK-like) 33 334 IPR011009 -
Spst4g02827 518 FunFam Mitogen-activated protein kinase 353 375 - -
Spst4g02827 518 CDD STKc_TDY_MAPK 37 374 - -
Spst4g02827 518 MobiDBLite consensus disorder prediction 406 440 - -
Spst4g02827 518 FunFam Mitogen-activated protein kinase 27 132 - -
Spst4g02827 518 MobiDBLite consensus disorder prediction 406 518 - -
Spst4g02827 518 Pfam Protein kinase domain 38 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02827 518 SMART serkin_6 38 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02827 518 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 37 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02827 Spst-Chr4 67952501 67957487 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02827 25 518 MAP Kinase Gene Family AT3G18040 80.000 0.0 813
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Spst4g02827 Pkinase 7.5e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02827 - - gmx:100787677 877.085