Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02823 ATGAAGATGAAGAGAAAAGAAAAGAAAAATGGAAGGAAGGATATGGGATTGTATTTATATCACCATGTGATTGCGCTCATTCATGTGGGTTTTTCCTTTGACCTTTCTTACCCTTGTGAAATGACAGGGATAGCAAATCGGGATAGCAAGATGCATGGCATCCTTGCAGTTTGGACTAATCTGGTGTACATCCTGGAGTTTGATTTGCCGCTCCAAAATGATGAATTTCAGCAAAATGTAGGTGGGCTGTGCATTACCGATGCAGCAAGCCAAAGGGTTTGGGTGAGGGGCTGCAGTAGATATGCTGGTATACCTTACTGGGCTGGTTTCCATAAAGCATATGCTTTTGGAATTATTATTGAATTGTTATTATTTATCCGTGCTTCACAGAATTACAATGCTCTTGGTTATGATGACAAGATCTTAGATGGTTTCTACGATCTGTATGGGAGCTTAACTGAGTCAAACCCCACTAGAATGCCTTCCCTTCTAGATTTGCAACTGCAAGCAACATCAATCTCAGGTAGTGGTACGTGGGAAGCTGTCTTGGTCAATAGGGCTGCTGATTCTAATTTGTTGAAACTTGTGCAAAAGGCCCAGGAGTTGACTGGCAAATCAAGTTCAGATTTTGAAGTTATAGATAGCAATTTGGTCCGCAAGCTTGCAATATTTGTGGCCGACTATATGGGTGGACAAGTTGGAGATCCTGAAAGTATGACAAGAGCATGGAGGAGTCTCAGTTACAGTCTAAAAGCAACCCTTGGTAGCATGTTTTTGCCACTTGGTTCTCTAACTATTGGATTGGCTCGGCATCGTGCATTGTTATTTAAGGTTCTAGCTGATAGTTTTGGCATCCCATGTCGGTTGGTGAAGGGGCTGCAATATACTAGTTCGGATGACATGGCAATGAACTTTGTCAAGATTGATGATGGAAGGGAGTACATTGTTGATCTAATGGCAGATCCTGGAACTCTTATTCCATCTGATGCAACTGGATCACAGATAGAGTACGATGAATCTTCATATGTGGCCAGTCCTTCATCAAGAGACCTTGATTCCTCGCATGTAGCGTCATCCAGCAGTGGAGTTGGAAGTTCATACGAAGAAACTTTGGATTTGGGGATGTTGGACAAAGAAAACAGATCAAAACATTTTTCACATACAGGTAAAGAATCTGATGCAAGCAAACCCACCGTGGGAAAGGATGAATCAATGAGACCCTTGAATGAATTTAAAAGCCCTCACAATGTCAAGAAGATCAAGGAGCAGGAAGCTCCTGGCAGACCTAATCATCCACATGTACTTGCAAGATCTCCTTCTTGGACTGAAGGGATCAATTCTCCTGCAGTACGAAGAATGAAAGTCAAAGACGTTTCTCTATACATGATTGATGCTGCGAAGGAAAACCCTCACTTAGCCCAGAAACTTCATGACGTTTTACTTGAAAGTGGTGTGGTTGCTCCTCCAAATCTATTTTCTGAAATTTATGATGATGAATCAGGTTCTTCAACTGAAGAAAAAGATGAACATAAGCAGGGAAGTAGACAGAAAGAAGCCGAGCTTGATGGTAATGTTTGTCATGCTCAAATTTTGCCTCCTTTGGCTCACCACCGAGTCCATACCAAAGCAAGTTCTAGTGGCCAGTTGGAGCATTCTAAACCTGTAGAAGGTTTAGGAATCAACCTTCCCCTTTATACAAGGGAAGCAGCGGTACAGTATATACCAACTCAGGCAAAATATGGGCAAAATGTCCCAGTCGCTGCTGCTGCAGCAGCCGCTGCGGCTGTTGTTGCATCATCTATGGTTGCTGCCGTGGCAAAATCTAGCATTGACTCAAACATAGATCTTCCAGTAGCAGCAGCTGCTACTGCTACTGCTACTGCTGCAGCTGTAGTAGCAACCACTGCTGCTGTCAGTAAACAGTATGAACAGGGCAGTCGAAGTGATGGAGATACAGACAGTGCTGGTTATGACCTGAAGGGTAGTGGTGATGGAGAGCATACAGCTTTAGGAGCAAATTCAGAAGGTGACAGAAGATCTGATAGATCAGTAGTAAGTAATGATAGCACAAAATCTGATTCGGCATTAGATGATCTTGATGTTGCCGAGGTTGACATTCCACGGGAGGAAATCACGCTCGGTGAGCGTATTGGACTTGGATCATATGGGGAGGTGTATCGTGGTGAATGGCGTGGGACTGAAGTTGCTGTAAAGAGGTTTCTAGATCAAGATATTTCTGGCGAATCACTTGATGAGTTCAAAACTGAAGTCAAAATAATGAAACGATTGAGGCATCCAAATGTTGTTCTCTTCATGGGAGCTGTAACTCGACCTCCAAATCTTTCAATTGTTACTGAATTTCTTCCCAGAGGAAGTTTGTATAGACTACTTCACAGACCAAACAGTCAATTGGATGAGCGAAGGCGTTTGAAGATGGCTCTGGATGCTGCTAGAGGAATGAACTATTTGCATAACTGCAGTCCAGTGATAGTGCATCGTGATTTGAAGTCCCCAAATCTTCTTGTTGACAAAAATTGGGTTGTGAAGGTATGTGATTTTGGCTTATCACGAATGAAGCATAGCACATTCCTTTCTTCCAGATCAACTGCAGGAACAGCCGAGTGGATGGCTCCTGAGGTGTTGAGAAATGAACCTTCAAATGAGAAGTGTGATGTTTATAGCTTTGGGGTCATATTATGGGAGCTCTCTACTTTGCAGCAACCCTGGGGTGGAATGAATCCAATGCAAGTTGTTGGTGCTGTGGGTTTCCAGCATCGCCGTCTTGAGATTCCTGATGATGTGGATCCTACCATAGCAGATATTATCAGGAAATGCTGGCAAACAGATCCAAAGTTGAGACCTACATTTGTTGAAATATTGGCGGCTCTGAAGCCTTTACAGAAGACAGTGATTGGTTCTCAAGTGCCTCGACCAAGTGCATCAGGGAAGCATGAGAAGGCTCAGTCATCGCGTGTTATAGAAGACCCAGCAAGATAG 2997 0.4334 MKMKRKEKKNGRKDMGLYLYHHVIALIHVGFSFDLSYPCEMTGIANRDSKMHGILAVWTNLVYILEFDLPLQNDEFQQNVGGLCITDAASQRVWVRGCSRYAGIPYWAGFHKAYAFGIIIELLLFIRASQNYNALGYDDKILDGFYDLYGSLTESNPTRMPSLLDLQLQATSISGSGTWEAVLVNRAADSNLLKLVQKAQELTGKSSSDFEVIDSNLVRKLAIFVADYMGGQVGDPESMTRAWRSLSYSLKATLGSMFLPLGSLTIGLARHRALLFKVLADSFGIPCRLVKGLQYTSSDDMAMNFVKIDDGREYIVDLMADPGTLIPSDATGSQIEYDESSYVASPSSRDLDSSHVASSSSGVGSSYEETLDLGMLDKENRSKHFSHTGKESDASKPTVGKDESMRPLNEFKSPHNVKKIKEQEAPGRPNHPHVLARSPSWTEGINSPAVRRMKVKDVSLYMIDAAKENPHLAQKLHDVLLESGVVAPPNLFSEIYDDESGSSTEEKDEHKQGSRQKEAELDGNVCHAQILPPLAHHRVHTKASSSGQLEHSKPVEGLGINLPLYTREAAVQYIPTQAKYGQNVPVAAAAAAAAAVVASSMVAAVAKSSIDSNIDLPVAAAATATATAAAVVATTAAVSKQYEQGSRSDGDTDSAGYDLKGSGDGEHTALGANSEGDRRSDRSVVSNDSTKSDSALDDLDVAEVDIPREEITLGERIGLGSYGEVYRGEWRGTEVAVKRFLDQDISGESLDEFKTEVKIMKRLRHPNVVLFMGAVTRPPNLSIVTEFLPRGSLYRLLHRPNSQLDERRRLKMALDAARGMNYLHNCSPVIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKHSTFLSSRSTAGTAEWMAPEVLRNEPSNEKCDVYSFGVILWELSTLQQPWGGMNPMQVVGAVGFQHRRLEIPDDVDPTIADIIRKCWQTDPKLRPTFVEILAALKPLQKTVIGSQVPRPSASGKHEKAQSSRVIEDPAR 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02823 998 CDD STKc_MAP3K-like 717 963 - -
Spst4g02823 998 FunFam Serine/threonine-protein kinase isoform 1 702 789 - -
Spst4g02823 998 Gene3D Phosphorylase Kinase; domain 1 704 788 - -
Spst4g02823 998 Pfam Ethylene-responsive protein kinase Le-CTR1 131 326 - -
Spst4g02823 998 ProSiteProfiles Protein kinase domain profile. 711 967 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02823 998 SUPERFAMILY Protein kinase-like (PK-like) 695 962 IPR011009 -
Spst4g02823 998 Gene3D Transferase(Phosphotransferase) domain 1 790 974 - -
Spst4g02823 998 MobiDBLite consensus disorder prediction 503 521 - -
Spst4g02823 998 FunFam Serine/threonine-protein kinase CTR1 790 973 - -
Spst4g02823 998 MobiDBLite consensus disorder prediction 493 521 - -
Spst4g02823 998 ProSitePatterns Protein kinases ATP-binding region signature. 717 738 IPR017441 GO:0005524
Spst4g02823 998 MobiDBLite consensus disorder prediction 338 367 - -
Spst4g02823 998 MobiDBLite consensus disorder prediction 973 998 - -
Spst4g02823 998 MobiDBLite consensus disorder prediction 671 686 - -
Spst4g02823 998 PRINTS Tyrosine kinase catalytic domain signature 785 798 IPR001245 GO:0004672|GO:0006468
Spst4g02823 998 PRINTS Tyrosine kinase catalytic domain signature 871 881 IPR001245 GO:0004672|GO:0006468
Spst4g02823 998 PRINTS Tyrosine kinase catalytic domain signature 890 912 IPR001245 GO:0004672|GO:0006468
Spst4g02823 998 PRINTS Tyrosine kinase catalytic domain signature 934 956 IPR001245 GO:0004672|GO:0006468
Spst4g02823 998 PRINTS Tyrosine kinase catalytic domain signature 824 842 IPR001245 GO:0004672|GO:0006468
Spst4g02823 998 MobiDBLite consensus disorder prediction 383 410 - -
Spst4g02823 998 MobiDBLite consensus disorder prediction 422 441 - -
Spst4g02823 998 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 417 968 - -
Spst4g02823 998 Pfam Protein tyrosine and serine/threonine kinase 711 962 IPR001245 GO:0004672|GO:0006468
Spst4g02823 998 MobiDBLite consensus disorder prediction 640 692 - -
Spst4g02823 998 SMART serkin_6 711 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02823 998 ProSitePatterns Serine/Threonine protein kinases active-site signature. 830 842 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02823 Spst-Chr4 67903856 67913274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02823 131 981 MAP Kinase Kinase Kinase AT1G73660 63.699 0.0 989
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Spst4g02823 PK_Tyr_Ser-Thr 1.1e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02823 - - vra:106769971 1510.35