Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02819 ATGTGGATGGTGGGTTACAATGAAGGTAGTGAGTTCAATATGGTTGATCATTCATTCAGTGGAAGGAAACTCAGGCCTCTCATGCCAAGGCCGATGACTTCTCTTAACACTGCACCACCAACAACCACTGTTAGCTTAACTCACCCCCATGGCAATGATTTCCCTTCACAACATGATTATCACCACCATTTTGCAGCAGTGGCAGAACGAAACAAGAGAGAGCAGTTCAATGGTACAGGACCAGTTGTGATGAGCTCATCAAGGTGGAATCCAACCCGAGAGCAACTAAGAGCCCTTGAAGAGTTGTATAGAAGAGGAACAAGGACACCATCTGCTGAGCAAATCCAACATATCACTGCACAACTTAGAAGGTTTGGTAACATTGAAGGGAAGAATGTGTTCTATTGGTTTCAGAATCACAAAGCCAGGGAAAGGCAAAAGCGTCGCCGCCAAATGGAATTAGACGCTGAAACTACTAAGAAAGATTCAGCTGCAAGTAGAGCAGTGTTTGAAGTTAAACAGACCAAGAACTGGACACCCTCAACAAACTGCAGCACTATTGCAGAGGAATCTGTTTCAACACAGAGGACTGCAAAAGCAGTGGCTGAAGAGAGTAGAACAGTTGAATCGCTCCAATTCGATGAAGGGGAATTACAACAAAGAAGAAACCTTTTGGAGAGGAATGCAACGTGGCATGTGATGCAGTTACATTGTCCTTCTCCTTTTGCACCTGTCATACCCCTCATAAACACCCCTCCTAATGCCGCTTCAGCTATCAGTATGGCCACTACTACAACCACAGTAACAACAACAAAAATGGACCCAAACCTCATTAAGACACATGATCTCAGCTTTTTTATTTCACCCCAGAGAGAAAACAGTGTTATCTACTTAAGTAGTAGCAGTAGTACTAGTGAAGATGATAACTGTGTGGAGTCTCAAACCCTTCAATTTTTCCCATTAAGGAGTGGTGATGCTTGCAATGACAACATGAGGGATAAGGAGACAGAGATATCAGCTTCAGCAATGAATGCCAATAACTTGACCCCAAGTCAGTTTTTTGAGTTCCTTCCTATGAAGGAGTAA 1086 0.4337 MWMVGYNEGSEFNMVDHSFSGRKLRPLMPRPMTSLNTAPPTTTVSLTHPHGNDFPSQHDYHHHFAAVAERNKREQFNGTGPVVMSSSRWNPTREQLRALEELYRRGTRTPSAEQIQHITAQLRRFGNIEGKNVFYWFQNHKARERQKRRRQMELDAETTKKDSAASRAVFEVKQTKNWTPSTNCSTIAEESVSTQRTAKAVAEESRTVESLQFDEGELQQRRNLLERNATWHVMQLHCPSPFAPVIPLINTPPNAASAISMATTTTTVTTTKMDPNLIKTHDLSFFISPQRENSVIYLSSSSSTSEDDNCVESQTLQFFPLRSGDACNDNMRDKETEISASAMNANNLTPSQFFEFLPMKE 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02819 361 SUPERFAMILY Homeodomain-like 86 152 IPR009057 -
Spst4g02819 361 FunFam WUSCHEL-related homeobox 4 86 153 - -
Spst4g02819 361 Pfam Homeodomain 86 146 IPR001356 GO:0003677
Spst4g02819 361 Gene3D - 84 147 - -
Spst4g02819 361 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 73 356 IPR044555 GO:0003700|GO:0099402
Spst4g02819 361 ProSiteProfiles 'Homeobox' domain profile. 92 147 IPR001356 GO:0003677
Spst4g02819 361 SMART HOX_1 84 151 IPR001356 GO:0003677
Spst4g02819 361 CDD homeodomain 88 148 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02819 Spst-Chr4 67887206 67889337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02819 1 360 Wox Gene Family AT3G18010 38.287 2.20e-61 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Spst4g02819 Homeodomain 2.3e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02819 - - gmx:100819541 546.969