Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02807 ATGGCTAGTGTTGTGACAGAGAAAGTGAAGCTTCTTGTGGCATTACTTACCCTGCAGCTCTGCTTTGCAGGATATCACATTGTGTCTAGACTTGCACTAAATATTGGTGTCAGCCAAGTCGTTTACCCTGTTTATCGAAATTTGATTGCTTTGCTTTTGTTGAGCCCATTTGCTTATCTGTTAGAGAAGAATCAAAGACCACCCCTCACTTTATCTTTACTGGTTCAGTTCTTCCTACTTGCATTACTGGGGATCACTGCAAACCAAGGGTTTTACTTGTTGGGATTATACTATGCTTCTCCAAGTTTTGCTTCTGCATTGCAAAACTTAGTTCCCGCTATCACTTTTGTCTTGGCCTTGGCTTTAAGGCTTGAAAAAGTCAACATCACAAGGAGAGATGGATTGGCAAAAGTTCTTGGAACCATTGCCAGTGTGGGGGGTGCCACAGTAATTACTCTTTACAAAGGTCCACCTCTTCTTCACCTGCAGATGGACCAAACACATGACACTATAGAAGTAGATCAGTCAACAAAAGCGCAAAATTGGACTTGGGGTGGCATATACTTGCTTGGACATTGTCTATCATGGGCTGGCTGGATAGTTTTTCAGGCTCCTGTGGTGAAGAAGTATCCGGCAAAACTAACCCTCACTTCGTTTACATGCTTCTTTGGATTGATCCAATTCTTGATCATAGCAGCCTTTGCCGAAGATGACTTGGAAAATTGGAAGATACAGTCACTGGAGGAGCTTTTCATCATCCTATATGCTGGAATTATAGCATCTGGCGTTGTCATATCTCTCCAGACATGGTGTATTCAAAAGGGTGGTCCCGTGTTTGTTGCTGTCTTCCAGCCTGTGCAGACTATTCTAGTTGTAGTCATGGCAGCCCTAATTCTTGGTGATCAGTTATTCTCTGGAGGGCTTATTGGTGCAATTCTCATTGTGCTTGGTCTATACTTAGTCCTATGGGGCAAAAACAATGAAAAAAAAGTGACTGAGTCATCCTCACTAACAAACCCCTTACTTAAGGCAGAGCAAGAGAATAAAGAAATTGATGCAGCTCCCAAAGACATACCATGA 1080 0.4259 MASVVTEKVKLLVALLTLQLCFAGYHIVSRLALNIGVSQVVYPVYRNLIALLLLSPFAYLLEKNQRPPLTLSLLVQFFLLALLGITANQGFYLLGLYYASPSFASALQNLVPAITFVLALALRLEKVNITRRDGLAKVLGTIASVGGATVITLYKGPPLLHLQMDQTHDTIEVDQSTKAQNWTWGGIYLLGHCLSWAGWIVFQAPVVKKYPAKLTLTSFTCFFGLIQFLIIAAFAEDDLENWKIQSLEELFIILYAGIIASGVVISLQTWCIQKGGPVFVAVFQPVQTILVVVMAALILGDQLFSGGLIGAILIVLGLYLVLWGKNNEKKVTESSSLTNPLLKAEQENKEIDAAPKDIP 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02807 359 Pfam EamA-like transporter family 184 322 IPR000620 GO:0016020
Spst4g02807 359 Pfam EamA-like transporter family 14 152 IPR000620 GO:0016020
Spst4g02807 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 326 - -
Spst4g02807 359 PANTHER WAT1-RELATED PROTEIN 12 334 IPR030184 GO:0016020|GO:0022857
Spst4g02807 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02807 Spst-Chr4 67791349 67793316 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02807 4 353 Nodulin-like Gene Family AT3G18200 67.135 2.75e-174 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02807 - - gmx:100812601 598.201