Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02806 ATGAGCGAAAGCACAGAGACCCAGAAGCGTGAATCAGCTGATTCAGAGGGCGAAAAGGATGGTGTTGCATCCAAAAAGCCAAAGATCGAATCTAGTGCTAAGGGGTCCGATGATAATGGCGTAAAGGAACCATCTTTCCTCATTGAAGCAGATGCTGCTGAAGACAAGGGCTCGAGGCTCACCATGGAGGATGCGTGGGTCGTGCTTCTCGATGCAAGTTTAGATTATCCTGGAAAATTGAGATGTGCACATTTTGCAATTTATGATGGGCATGGAGGGCGTTTGGCTGCAGAATATGCTCAAAAGCATTTGCATAGGAATGTTCTTTCTGCAGGATTACCACGTGAGTTGTATGATGCGAAGGCAACTAAACAATCTATTCTGAATGGCTTCCTCAAAACTGACAAGTCTCTTCTCAAAGAAAGCGCTGAAGGGGGATGGCAGGATGGGGCTACAGCTGTATGTGTTTGGGTATTGGGACAAAGAGTTGCGGTTGCACATATAGGAGATGCCAAGGCAGTATTAGCTCGGTCAACTGATGGATCTCGAAATCCAGATGGTGTCCAGGCGCTGAAGGCCATTGTTTTGACTAGAGAACACAAACCTATCTTCCCACTGGAGCGTACACGCATTCAGAAGTCAGGGGGTTTCGTGAGTCCAGATGGACGTTTGTTAGGGCGTCTAGAAGTTTCTAGAGCTTTTGGAGATCGCCAGTTTAAAAAGGTAGGTCTTGTTGCAACTCCGGATCTCTATACTTTTGAAGTTACTGATACAGAGCATTTCATAATTCTTGGTTGTGATGGCTTGTGGGGGGTATTTGGTCCCAGTGATGCTGTCGATTTTGTTCAGAAGTTATTAAATGAGGGGCTACCTGTTGGCACTGTGTGCCGCCGTCTTGTAAGAGAGGCTGTTCGTGAGCGGCGCTGTAAAGATAACTGCACTGCCATTATCATTGTATTTAAGCACAATTAA 972 0.4609 MSESTETQKRESADSEGEKDGVASKKPKIESSAKGSDDNGVKEPSFLIEADAAEDKGSRLTMEDAWVVLLDASLDYPGKLRCAHFAIYDGHGGRLAAEYAQKHLHRNVLSAGLPRELYDAKATKQSILNGFLKTDKSLLKESAEGGWQDGATAVCVWVLGQRVAVAHIGDAKAVLARSTDGSRNPDGVQALKAIVLTREHKPIFPLERTRIQKSGGFVSPDGRLLGRLEVSRAFGDRQFKKVGLVATPDLYTFEVTDTEHFIILGCDGLWGVFGPSDAVDFVQKLLNEGLPVGTVCRRLVREAVRERRCKDNCTAIIIVFKHN 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02806 323 CDD PP2Cc 53 320 IPR001932 -
Spst4g02806 323 MobiDBLite consensus disorder prediction 1 37 - -
Spst4g02806 323 PANTHER PROTEIN PHOSPHATASE 2C 26 318 IPR015655 GO:0004722|GO:0006470
Spst4g02806 323 MobiDBLite consensus disorder prediction 1 42 - -
Spst4g02806 323 ProSiteProfiles PPM-type phosphatase domain profile. 49 320 IPR001932 -
Spst4g02806 323 Gene3D - 23 323 IPR036457 -
Spst4g02806 323 Pfam Protein phosphatase 2C 54 308 IPR001932 -
Spst4g02806 323 SUPERFAMILY PP2C-like 46 321 IPR036457 -
Spst4g02806 323 SMART PP2C_4 35 318 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02806 Spst-Chr4 67784698 67788977 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02806 46 272 PP2C-type Phosphatase Gene Family AT1G18030 71.304 4.95e-118 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02806 K17500 - gmx:100815852 551.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02806 4 67784698 67788977 Spst4g02806 4 67784698 67788977 ECH