Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02785 ATGAGATTGAGGTGTGATCTCTTTGAGTGCTGCTTCACTAGCACATCTTCTGATACATTTCCAAAGCACAGTAAGTCGAAGTGGCGAATATTTTCGTATAAGGAACTTGCGAAAGCCACAAATTATTTTGAACAATCTCATTGTCTTAGAAAGGGAATTGAAAAGAGAGGCTTTACCACTCAATATTACGGAACACTTGAGGATGGACGTGAGATTACAGTACAGTGCTTTAAAGAAGACAAGCGCTACATATTGCAACAGTTTATCAATGAAACTGTTATCCTAAATTACTTGCCTCACAAAAATATTGTGTCAATTTATGGGTGTAGTTCTCATCACGAGGAACCTCTACTAGTGCAAGAGTACCTATCCAATGGAAATCTTGCTGCTCATTTTCAAAGTAACATTTCACTACCTTGGCATAAACGACTGGATATAGCCATTGATATTGCAAATGCATTGGACTATCTTCACTATTACGGCATCATCCACCGGAATGTGAAGTCCAGCAATATTCTCCTACATGAGAACTTTTCTGCTAAAGTTGGTAGCCTTCATTTATCACGGAAACTTCCAGATGGAGTTCCTGTTGATGCCACCCATCTTACTAGTGATAGAGTAGGTTCAAGTGGTTATATAGACCCAGAGTATTTGACAAAAGGCCAGCTTAGCGTAAAAAATGATGTTTATAGCTTTGGAGTGGTGTTGTGTGAGCTTCTATCATCACAGCTGGCAAAAAATTGGGTTCTGAATGAAGAGGAAAATCTTGCTACCCTTTTAAGTAGAAAACTTGAAAACCAATCTTTGGTGGAGCTGTTGGATCCAAGACTTGGGTTCCAATCAAACCTTATGATCAAGCAGGTGATGACTGCTACAGCTGAGCTTGCAGTTCTGTGCATGAAATGTCCACAAGAATCAAGGCCAAACATGGAACAGGTGCTAGAGATTCTGTATCAAATGAAGCAAGGGAGATATAAAATAAACTCTTTCTGCACTAAAGCTCTGAAAATCTTCCACCACGCCGACCTTGAAGAAGCTACTAACAATTTTGGCACTTGCCTTGGAGAGGGAGGGTACGGCAGCGTGTACTATGGAAAACTTAAAGATGGGCTAGAGGTTGCAATAAAACGTTTCCATGACGAGAACGAGACAGAAGAGACCATTAACCAATTCATGAAAGAAAGTGAGATCTTAGGTCTCTTGCACCATCAAAATCTGGTTTCACTTTATGGCCGCACTTCTCGCCATAGCAACAAACACATGCTAGTGTACGAGTACATCTCCAATGGAACTCTTTCTAAACATCTTCATGAATCCTCCAGCAAACTACCATGGCATACTAGATTGAACATTGCCATCGAAACTGCGACTGCCTTAGTATATCTGCATGACTCAGGCATCATCCACCGGGATGTGAAAGGGAGTAATATCCTGTTGGATGAAAATTTTATTGTTAAAGTTGCAGATTTTGGATTCTCACGGTCTCTTCCAGACCATGTTACTCATGTTACAACTATTCCAGTAGGAACTCGTGCTTACATAGATCCTGACTACTACTTATCTGGAAGGGTCAGTAACAAAAGTGATGTCTACAGTTTTGGAGTGGTCTTGTTTGAACTCATATCATCTATCCGCCCAAGTTTAGTGGCAGGCACAGATAATACTCTTGCACAGTTTGCAAAGGACAAAATCTTGAACAGTGAATTAAAAGAGATAGTGGATCCTAGTTTTTGGCGTGGTTCTGACAAAAACATTGTGAAAATGGTAACAGCAGTGGCAGAGTTAGCATTTCAGTGTGTGCAGTGTCCCAAGGAACTCAGACCATCCATGAAACAGGTGCTAGAGACCCTGGAGGGCATAAGGAAAGGAAAATGGGGATTCAACCAGATAACATAG 1896 0.4082 MRLRCDLFECCFTSTSSDTFPKHSKSKWRIFSYKELAKATNYFEQSHCLRKGIEKRGFTTQYYGTLEDGREITVQCFKEDKRYILQQFINETVILNYLPHKNIVSIYGCSSHHEEPLLVQEYLSNGNLAAHFQSNISLPWHKRLDIAIDIANALDYLHYYGIIHRNVKSSNILLHENFSAKVGSLHLSRKLPDGVPVDATHLTSDRVGSSGYIDPEYLTKGQLSVKNDVYSFGVVLCELLSSQLAKNWVLNEEENLATLLSRKLENQSLVELLDPRLGFQSNLMIKQVMTATAELAVLCMKCPQESRPNMEQVLEILYQMKQGRYKINSFCTKALKIFHHADLEEATNNFGTCLGEGGYGSVYYGKLKDGLEVAIKRFHDENETEETINQFMKESEILGLLHHQNLVSLYGRTSRHSNKHMLVYEYISNGTLSKHLHESSSKLPWHTRLNIAIETATALVYLHDSGIIHRDVKGSNILLDENFIVKVADFGFSRSLPDHVTHVTTIPVGTRAYIDPDYYLSGRVSNKSDVYSFGVVLFELISSIRPSLVAGTDNTLAQFAKDKILNSELKEIVDPSFWRGSDKNIVKMVTAVAELAFQCVQCPKELRPSMKQVLETLEGIRKGKWGFNQIT 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02785 631 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Spst4g02785 631 SUPERFAMILY Protein kinase-like (PK-like) 19 320 IPR011009 -
Spst4g02785 631 ProSiteProfiles Protein kinase domain profile. 348 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02785 631 FunFam Wall-associated receptor kinase 3 427 630 - -
Spst4g02785 631 ProSiteProfiles Protein kinase domain profile. 43 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02785 631 ProSitePatterns Protein kinases ATP-binding region signature. 354 376 IPR017441 GO:0005524
Spst4g02785 631 SMART serkin_6 348 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02785 631 SMART serkin_6 43 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02785 631 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 335 624 IPR044652 GO:0004672
Spst4g02785 631 SUPERFAMILY Protein kinase-like (PK-like) 328 621 IPR011009 -
Spst4g02785 631 Gene3D Transferase(Phosphotransferase) domain 1 123 333 - -
Spst4g02785 631 Gene3D Transferase(Phosphotransferase) domain 1 427 626 - -
Spst4g02785 631 Gene3D Phosphorylase Kinase; domain 1 334 426 - -
Spst4g02785 631 Gene3D Phosphorylase Kinase; domain 1 17 122 - -
Spst4g02785 631 Pfam Protein tyrosine and serine/threonine kinase 350 617 IPR001245 GO:0004672|GO:0006468
Spst4g02785 631 Pfam Protein tyrosine and serine/threonine kinase 67 317 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02785 Spst-Chr4 67596638 67599244 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02785 335 621 Receptor kinase-like Gene Family AT1G25390 51.689 5.66e-89 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Spst4g02785 PK_Tyr_Ser-Thr 2.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02785 - - vra:106773095 1055.43