Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02783 ATGACGTTTATTAATTGCCTTATGAGAATGAGGTGCAATCTCTTTGAGTGCTGCTGCACTAGCACTTCTGACACATTTCCAAAGCAGAGTAAATGGAAAATCTTGCCCTACGAGAAACTTGCAAAAGTCACAGATAACTTCAATCGATCTCATTGTCTTGGAAAAAGAGGCTTTGCCACTGAGTATTACGGAAAACTTGAGGATGGGCGCGAGATTATGATCCAGTGCTTCAACGAAGACAAGCATCATACATTGCAACAATTTATCAATGAAACTTCTATTCTAAATGACTTGCCTCACAAAAATATTGTGTCAATTTATGGGTATGCTTCTCACAATGAACAATCCCTGCTAGTCCATGAATACATATCCAATGGCAATCTTGCTGCTCATCTTAAAAGTGAAGATGGAAACAGCACACAATCTTGGCTGACACGATTAGATGTAGCCATTGACATTGCAAATGCAGTGGACTATCTTCACTATTATGGCATCATCCACCGCAATGTAAAATCCAGCAATATTCTCCTAGATGTGAACTTTTCTGCTAAACTTGCTAACCTTCATTTATCATGCAAACTTCCAGCTGGAGTTCCTGTCTATGCCACCCATGTTACTAATGATATAATTGGAACATGTGGTTATATCGACCCGGAGTATTTGAAAAAGGGACAGCTTAGTGTAAAAAATGATGTTTATAGCTTTGGGGTAGTGTTGTGTGAGCTTCTATCATCAAAGCTGGCAAAATACTGGGTTCTAAACGAGGAGGATAATCTTGCTACCCTTTTAAGCAGAAAAATTGAACGCTCTGAGCTTGCACTTTTGTGCATGAAATGTCCACAAGAATTAAGGCCAAGCATGGAACAGGTGCTAGAGATTCTCAATGGCATAAAGCAGGGGAGACATGAAACAAACACAACAAAAGCTTTGAAAATCTTCCACCCTGCTGAACTCGAAGAGGCTACTAACAACTTTGATACTTGCCTTGGAAAGGGAGGCTATGGCACCGTGTACTATGTGTGCCATGTATTACGAAAACTTAAGGATGGGCGAGAGGTTGCAATAAAATGTTTCCATGACGAGAGTGAGACAGAAAAGACTATTAAGCAATTCATGCAAGAAATTGAGATCTTGGGTCTGTTGCACAATATAAATCTGGTTTTACTTTATGGCCGCACTTCTCGCCATAGCAACAAACACATGCTAGTGTACGAGCACATCTCCAATGGCACTCTTTCTAAACATCTTCATGAATCTTACTGTGGCAAACTACCATGGCATACTAGATTGAACATAGCCATCGAAACTGCAACTGCCTTGGTATATCTTCATGACTCGGGCATCATCCACCGAGATATTTTTGGATTCTCACGGTCTCTTCCAGATCATGTCACTCACGTTTCCACTATTCCTGTAGGAACACGTGCTTACATAGATCCTGACTACTATGAATCTGGAAGGGTCAGTGACAAAAGTGAATTCTATAGTTTTGGGGTGGTATTGTTGGAACTTATATCTTCCAACCCCCCAATTTTATTGGAAGGCACAGAATATGTTACTCTTGCACAGTTTGCAAAGGGAAAAATCTTAAACAGGGAATTAAACGCGGTAGTGGATCCAAGCTTTTGGTTTGGTGTTGACGGAAACATGATGGAAATGATAACGGCAGTGGCAGAGTTAGCATTTCAGTGTGTGCAGTGTCCCAAGGAACTCAGACCATCTATGAATCAGGTGGTAGACACCCTTGAGGGCATTAGGAAAGGAACATGGGGATTCAACCAGATAACATAG 1791 0.4093 MTFINCLMRMRCNLFECCCTSTSDTFPKQSKWKILPYEKLAKVTDNFNRSHCLGKRGFATEYYGKLEDGREIMIQCFNEDKHHTLQQFINETSILNDLPHKNIVSIYGYASHNEQSLLVHEYISNGNLAAHLKSEDGNSTQSWLTRLDVAIDIANAVDYLHYYGIIHRNVKSSNILLDVNFSAKLANLHLSCKLPAGVPVYATHVTNDIIGTCGYIDPEYLKKGQLSVKNDVYSFGVVLCELLSSKLAKYWVLNEEDNLATLLSRKIERSELALLCMKCPQELRPSMEQVLEILNGIKQGRHETNTTKALKIFHPAELEEATNNFDTCLGKGGYGTVYYVCHVLRKLKDGREVAIKCFHDESETEKTIKQFMQEIEILGLLHNINLVLLYGRTSRHSNKHMLVYEHISNGTLSKHLHESYCGKLPWHTRLNIAIETATALVYLHDSGIIHRDIFGFSRSLPDHVTHVSTIPVGTRAYIDPDYYESGRVSDKSEFYSFGVVLLELISSNPPILLEGTEYVTLAQFAKGKILNRELNAVVDPSFWFGVDGNMMEMITAVAELAFQCVQCPKELRPSMNQVVDTLEGIRKGTWGFNQIT 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02783 596 ProSiteProfiles Protein kinase domain profile. 47 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02783 596 SUPERFAMILY Protein kinase-like (PK-like) 24 298 IPR011009 -
Spst4g02783 596 Gene3D Transferase(Phosphotransferase) domain 1 407 590 - -
Spst4g02783 596 Gene3D Transferase(Phosphotransferase) domain 1 123 299 - -
Spst4g02783 596 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 306 589 IPR044652 GO:0004672
Spst4g02783 596 Pfam Protein tyrosine and serine/threonine kinase 326 453 IPR001245 GO:0004672|GO:0006468
Spst4g02783 596 Pfam Protein tyrosine and serine/threonine kinase 53 290 IPR001245 GO:0004672|GO:0006468
Spst4g02783 596 ProSiteProfiles Protein kinase domain profile. 323 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02783 596 Gene3D Phosphorylase Kinase; domain 1 19 122 - -
Spst4g02783 596 Gene3D Phosphorylase Kinase; domain 1 300 406 - -
Spst4g02783 596 SUPERFAMILY Protein kinase-like (PK-like) 306 586 IPR011009 -
Spst4g02783 596 ProSitePatterns Protein kinases ATP-binding region signature. 329 356 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02783 Spst-Chr4 67592255 67594788 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02783 310 586 Receptor kinase-like Gene Family AT1G25390 46.333 1.20e-71 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Spst4g02783 PK_Tyr_Ser-Thr 1e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02783 - - vun:114181918 1024.62