Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02780 ATGGATAAACGTGGACTTTTCCCCATGTATCGCAGTCTCTCTCTGTTATTCCTCTTCTCCGTAACTGCAACGCTTCTTATTCCGAGTCGAAGTGATGCCAAAGTTAACACTTCGGTTTTTGAGAGTAAACGGCACTCAAACAGCGGTTTAACAACAGTTAAAGTTATGGACAAAGCCAGAAACAGACGCCATCTTGTCAGATATGCCGACCTGAACTGCAGTGCTGATGGAAAAATGAAACGGCTCGTTCATGCACTCATAGCAGCTCAACATCGTCATCTCCAGTATTATCGCCCTTACCAACAAATTCGTCATCACAACCATTGCCATCTCCACGACGAACACCAATTTCATCAATATTTCCAGAGTGACCCATATATTGAAGCATTCTTAACAAATCATGGAGCTCTTGCACAGAAAAGATACAAATTTTCAGAAGTTAAGAAAATGACTAATTCATTCAGAGTTAAACTTGGTGAAGGTGGTTTTGGATCAGTGTACGAAGGAAAGATACACAACGGTTGCCATGTGGCTGTAAAATTACTGAATGCATCCAAAAGAAATGGTGAAGAATTTATCAATGAGGTTGCTACCATAAGTAGAACATCTCATGTTAACATTGTCTCACTACTTGGATTTTGTCTGGAAGGTCGCAAAAAAGCTCTCATCTATGAGTTTATGGCTAATGGTTCTTTGGACAAGTTTATCTACAAAAGAGGGTCAACAATTGCATCTTTGAGCTGGGAGAATTTATATCAAATTTCAATAGGGATAGCTCGAGGGTTGGAGTACTTGCATAGGGGCTGTAAAACTAAAATTTTACATTTTGACATAAAGCCACATAATATTCTTTTAGATGAGAATTTCTGTCCCAAAATATCAGATTTTGGGCTAGCAAAGCTATGTCCCAGGAAAGAAAGCATTGTTTCTATATCTGATACTAGAGGGACAATGGGGTATGTAGCTCCAGAAATGATAAATAGACATTTTGGTGGAGTTTCGCACAAGTCCGATGTTTATAGTTATGGAATGATGCTGCTAGAAATGGTAGGAGGGAGGAAGAACATCAATGCTGAAGCTAGTCATACAAGTGAGATATACTTTCCACATTTGGTATACAGGAGACTTGAGTTGGATGATGATGTTAGACCGGATGAGGCGATGAATACAGAAGAAAATGAGATTGCAAAGAGAATGACTGTAGTGGGTTTATGGTGCATTCAAACATTACCAAATGATAGACCTACAATGAGTAGAGTAGTAGAAATGTTGGAAGATAACATGAATTCCTTGGAAATGCCTCCAAAACCTTTGTTTTCTTCTCCTAGTAGATCAATAACGGAATCTTACTCTTGA 1356 0.3879 MDKRGLFPMYRSLSLLFLFSVTATLLIPSRSDAKVNTSVFESKRHSNSGLTTVKVMDKARNRRHLVRYADLNCSADGKMKRLVHALIAAQHRHLQYYRPYQQIRHHNHCHLHDEHQFHQYFQSDPYIEAFLTNHGALAQKRYKFSEVKKMTNSFRVKLGEGGFGSVYEGKIHNGCHVAVKLLNASKRNGEEFINEVATISRTSHVNIVSLLGFCLEGRKKALIYEFMANGSLDKFIYKRGSTIASLSWENLYQISIGIARGLEYLHRGCKTKILHFDIKPHNILLDENFCPKISDFGLAKLCPRKESIVSISDTRGTMGYVAPEMINRHFGGVSHKSDVYSYGMMLLEMVGGRKNINAEASHTSEIYFPHLVYRRLELDDDVRPDEAMNTEENEIAKRMTVVGLWCIQTLPNDRPTMSRVVEMLEDNMNSLEMPPKPLFSSPSRSITESYS 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02780 451 ProSiteProfiles Protein kinase domain profile. 152 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02780 451 FunFam PR5-like receptor kinase 227 436 - -
Spst4g02780 451 Pfam Protein kinase domain 156 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02780 451 Gene3D Phosphorylase Kinase; domain 1 122 226 - -
Spst4g02780 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 273 285 IPR008271 GO:0004672|GO:0006468
Spst4g02780 451 Gene3D Transferase(Phosphotransferase) domain 1 227 434 - -
Spst4g02780 451 SUPERFAMILY Protein kinase-like (PK-like) 137 425 IPR011009 -
Spst4g02780 451 MobiDBLite consensus disorder prediction 434 451 - -
Spst4g02780 451 CDD STKc_IRAK 158 425 - -
Spst4g02780 451 SMART serkin_6 152 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02780 451 ProSitePatterns Protein kinases ATP-binding region signature. 158 180 IPR017441 GO:0005524
Spst4g02780 451 PANTHER RUST RESISTANCE KINASE LR10-RELATED 126 442 IPR045874 GO:0004672
Spst4g02780 451 MobiDBLite consensus disorder prediction 431 451 - -
Spst4g02780 451 FunFam serine/threonine-protein kinase PBS1-like 127 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02780 Spst-Chr4 67571359 67574550 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02780 142 439 Receptor kinase-like Gene Family AT1G66980 60.596 2.97e-126 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Spst4g02780 Pkinase 2.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02780 - - gmx:100800335 607.446