Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02779 ATGATCCGCAGGAGTCTCCCTCTTTTCTTCCTCCTCTCTTTCACTGCCACGCTTCTTATTCCAACTACCAGTAGCAGTCATGTCCATTTTAACATTTTGTCACTGCTTCAGCAGGATTTCAGGAGGAGCATCATATCACGCTTACTGGGAAGTGATGAATCTGCCAAGCAAAAGGCTGAACATGATGTGTCAAGCAATGGTGTTGCAAGTGCGGCTATGGTAATATTCATCATATGTATCATAATTTGTTGTTTAAGATATAACCAACTAGTGAAATTTTGTTCTACCACAAAGAATGACCAAAATATTGAAGTATTCTTAAAAGATCATGGAGATGTGTCACAAAAAAGATACAAATTTGCAGAAGTGAAGAAAATGACCAATTCCCTCAAAGTTAAACTTGGTCAAGGTGGTTTTGGTGCAGTATACAAAGGACAACTACCCACTGGGACCCCTGTGGCTGTAAAATTATTGAACGCATCCAAAAGAAACGGTGAAGAATTTATGAATGAGGTTGCTAGCATTAGTAGAACCTCTCATATTAATATCGTGTCACTTCTTGGATTTTGTTATGAAGGCAACAAGAAAGCTCTGATCTATGAGTTTATGGCAAATGGTTCGCTCGAAAAGTTTATCTACAAAAGAGGGACAGAAACCATTACATGTTTGAGTTGGGAGAATTTATACCAAATCTCAATTGGAATAGCTCGAGGGTTGGAGTACTTACACAGGGGATGCAACACTAGAATTTTACACTTTGACATAAAACCGCATAACATTCTTTTGGATGAAAATTTGTGTCCCAAGATATCAGATTTTGGGTTAGCAAAGCTCTGTCCCAGAAACGAGAGCATCATTTCCATGGCAGATACTAGAGGGACAATGGGGTATGTAGCTCCAGAAATGTGCAACAGACAATTTGGTGGAGTTTCACATAAGTCTGATGTTTATAGTTATGGGATGATGTTGCTAGAAATGGTAGGAGGGAGGACGAACATCAATCCTGAAGCTAGTCATACAAGTGAGATATACTTCCCATATGTGATACACAAGAGGCTTGCGCTGGACAAGGATTTAAGGCCTGATGAAGAGATGACTGCGGAAGAAAATGAGATTGCAAAGCGAATGACCATAGTTGGTTTATGGTGCATTCAAACGTTTCCAAATGATAGACCTACAATGAGCAAAGTAGTAGACATGCTCGAAAGCAACGTGAATTTCTTGGAAATGCCACCAAAACCTATGTTCTCTTCACCTACTAGATCCACAGCAGAATCTTCCCCTTTGATTTAA 1293 0.3952 MIRRSLPLFFLLSFTATLLIPTTSSSHVHFNILSLLQQDFRRSIISRLLGSDESAKQKAEHDVSSNGVASAAMVIFIICIIICCLRYNQLVKFCSTTKNDQNIEVFLKDHGDVSQKRYKFAEVKKMTNSLKVKLGQGGFGAVYKGQLPTGTPVAVKLLNASKRNGEEFMNEVASISRTSHINIVSLLGFCYEGNKKALIYEFMANGSLEKFIYKRGTETITCLSWENLYQISIGIARGLEYLHRGCNTRILHFDIKPHNILLDENLCPKISDFGLAKLCPRNESIISMADTRGTMGYVAPEMCNRQFGGVSHKSDVYSYGMMLLEMVGGRTNINPEASHTSEIYFPYVIHKRLALDKDLRPDEEMTAEENEIAKRMTIVGLWCIQTFPNDRPTMSKVVDMLESNVNFLEMPPKPMFSSPTRSTAESSPLI 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02779 430 CDD STKc_IRAK 134 402 - -
Spst4g02779 430 Pfam Protein kinase domain 131 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02779 430 Gene3D Phosphorylase Kinase; domain 1 89 202 - -
Spst4g02779 430 SMART serkin_6 128 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02779 430 ProSitePatterns Protein kinases ATP-binding region signature. 134 156 IPR017441 GO:0005524
Spst4g02779 430 ProSiteProfiles Protein kinase domain profile. 128 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02779 430 PANTHER RUST RESISTANCE KINASE LR10-RELATED 99 420 IPR045874 GO:0004672
Spst4g02779 430 Gene3D Transferase(Phosphotransferase) domain 1 203 409 - -
Spst4g02779 430 SUPERFAMILY Protein kinase-like (PK-like) 117 402 IPR011009 -
Spst4g02779 430 FunFam serine/threonine-protein kinase PBS1-like 96 202 - -
Spst4g02779 430 FunFam PR5-like receptor kinase 203 413 - -
Spst4g02779 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 250 262 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02779 Spst-Chr4 67565467 67568726 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02779 69 417 Receptor kinase-like Gene Family AT4G18250 54.062 8.85e-126 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Spst4g02779 Pkinase 2.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02779 - - gmx:100800335 608.216