Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02778 ATGGAGGAAGGTCATCAATCAGAGGAGACACAGGTTGTTCTGGCTGCAGGTAAAAAACACTTAAACAGGGTTTGGACAACAAATAAAGTGGTGATCAAAGGTAATGATGATGGCAACCTTAAAGTGGATTATGTCTTCATGGCGTGCGGCGATATGAAAAATTGCAGCAGTAGCACCATCACACGCTCACCTGGAAGTGATGAATCTGCTATGTTGGCACGTGTGAAATATAGCAGTTTTAATTTATCACTTGCAGAACTCAGTGAAAATAATGTGTCAAGTACGAAAAACAAGAGTGGCAATACTCTGATCTCAGAACCTCATATCTTAAGTACACAATATAAGAGTTCTAATAAAACTCTGCTCGCTGAACCTCGTGTGCTCAATGGCAACAAGAAAGCTCTGATCTATGAGTTTATGGCAAATGGTTCGCTCGAAAAGTTTATCTACAAAAGAGGGACAGAAACCATTACAAGTTTGAGTTGGGAGAATTTATACCAAATCTCAATTGGAATAGCTCGAGGGTTGGAGTACTTACACAGGGGATGCAACACTAGAATTTTACACTTTGACATAAAACCGCATAACATTCTTTTGGATGAAAATTTTTGTCCCAAGATATCAGATTTTGGGTTAGCAAAGCTCTGTCCCAGAAAAGAGAGCATTATTTCCATGGCAGATACTAGAGGTACAATGGGGTATGTGGCTCCAGAAATGTGCAACAGACAATTCGGGGGAGTTTCACATAAGTCCGATGTATATAGTTATGGGATGATGCTGCTAGAAATGGTAGGAGGGAGGACGAACATTAATGCTGAAGCTAGTCATACAAGTGAGATATACTTCCCACATTTGATTCACAAGAGGCTTGCGTTGGACAAGGATTTAAGACCTGATGAAGTGATGACTACGGAAGAAAATGAGATTGCAAAGCGAATGACCATAGTAGGTTTATGGTGCATTCAAACGTTTCCAAATGATAGACCTACAATGAGCAAAGTGGTAGATATGCTCGAAGGCAACATGAATTTATTGGAAATGCCACCAAAACCTATGTTTTCTTCGCCTACTAGATCCACAACAGAATCTTCCTCTTAA 1098 0.3998 MEEGHQSEETQVVLAAGKKHLNRVWTTNKVVIKGNDDGNLKVDYVFMACGDMKNCSSSTITRSPGSDESAMLARVKYSSFNLSLAELSENNVSSTKNKSGNTLISEPHILSTQYKSSNKTLLAEPRVLNGNKKALIYEFMANGSLEKFIYKRGTETITSLSWENLYQISIGIARGLEYLHRGCNTRILHFDIKPHNILLDENFCPKISDFGLAKLCPRKESIISMADTRGTMGYVAPEMCNRQFGGVSHKSDVYSYGMMLLEMVGGRTNINAEASHTSEIYFPHLIHKRLALDKDLRPDEVMTTEENEIAKRMTIVGLWCIQTFPNDRPTMSKVVDMLEGNMNLLEMPPKPMFSSPTRSTTESSS 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02778 365 ProSiteProfiles Protein kinase domain profile. 10 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02778 365 PANTHER RUST RESISTANCE KINASE LR10-RELATED 129 358 IPR045874 GO:0004672
Spst4g02778 365 Gene3D Transferase(Phosphotransferase) domain 1 88 363 - -
Spst4g02778 365 SUPERFAMILY Protein kinase-like (PK-like) 129 339 IPR011009 -
Spst4g02778 365 SMART serkin_6 41 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02778 365 FunFam PR5-like receptor kinase 140 350 - -
Spst4g02778 365 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Spst4g02778 365 MobiDBLite consensus disorder prediction 346 365 - -
Spst4g02778 365 Pfam Protein kinase domain 127 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02778 Spst-Chr4 67556811 67563723 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02778 130 365 Receptor kinase-like Gene Family AT1G66910 55.833 1.26e-89 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Spst4g02778 Pkinase 4.4e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02778 - - gmx:100799800 421.009