Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02777 ATGGATTGTTCTTTGTTCTCACCACTGCGTGTTTTTGCAGGCAAATCGAACAAAAAGAAGAAACTCATTATTATTGGTGTTACAGGTTCAGCAATTGCTGGAGTGTTAATATCAATTGCAATTCTGTGTGTCAGATACAAGTCACCAACCTGGCAAGCGAATTCTGGGTTGACTTCAAAAGGTAATCAAAATATTGAAGCATTCCTAAAAATTCACGGCTCTCTAGCTTTGAAAAGATATAAATTATCACATGTAAAAAAAATCACCAACAACTTCAAGGTGAAGCTGGGAAAAGGTGGTTTTGCTGTGGTGTACAAAGGAAAGTTATCCAATGGTAGTCCTGTGGCTGTAAAGATGTTAAATGCATCGAAGAAAAGTGGTGAAGAATTTATCAACGAGGTTGCTAGCATCAGTCGAACTTCTCATGTAAATGTGGTCAATCTTCTTGGATTTTGTTTGAAAGGTCGAAAGAGAGCTCTCATATATGAATTTATGCCCAACGGTTCCCTTGACAAATTCATTTATAGAGAAGGACATGAGACCCTTTCACCTTTGAGTTGGGATATCATATATCAAATTGCAAAGGATATAGCTCGAGGGTTAGAATACTTGCATAAGGGATGCAACACTCGAATTTTTCACTTCGACATTAAACCACATAACATTCTTCTGGATGAGAATTTTTGTGCAAAGATATCGGATTTCGGGTTGGCAAAACTGTGTCCTAGGAATGAAAGTATTATTTCCTTGTCAGATGCTAGAGGAACAATGGGGTATGTAGCTCCAGAAATGTGGAGTAGAAATTTTGGAGGGGTTTCACATAAATCTGATGTTTATAGTTACGGAATGATGCTGCTAGAGATGGTGGGAGGGAGGAAAAATATTAATGCTGAAGCTAGTCATACAAGTGAGATATACTTCCCACACTGGGCATACAATCAGCTTGAGTTGGACAATGATTTGAGACCAGATATGGTGATGACAACAGAAGAAAATGAGATTGCAAAGAGGTTGGTCATAGTAGGTTTATGGTGCACTCAAACGTTTCCTAATGAGAGACCTACAATTAGTAGAGTGATAGATATGTTGGAAGGCAACATGAACTCCCTAGAAATCCCACCAAAACCTTCGCTTTCTTCTCCCACTAGATCAGTGCCAGAATCTTCCATTTCCTGA 1176 0.3869 MDCSLFSPLRVFAGKSNKKKKLIIIGVTGSAIAGVLISIAILCVRYKSPTWQANSGLTSKGNQNIEAFLKIHGSLALKRYKLSHVKKITNNFKVKLGKGGFAVVYKGKLSNGSPVAVKMLNASKKSGEEFINEVASISRTSHVNVVNLLGFCLKGRKRALIYEFMPNGSLDKFIYREGHETLSPLSWDIIYQIAKDIARGLEYLHKGCNTRIFHFDIKPHNILLDENFCAKISDFGLAKLCPRNESIISLSDARGTMGYVAPEMWSRNFGGVSHKSDVYSYGMMLLEMVGGRKNINAEASHTSEIYFPHWAYNQLELDNDLRPDMVMTTEENEIAKRLVIVGLWCTQTFPNERPTISRVIDMLEGNMNSLEIPPKPSLSSPTRSVPESSIS 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02777 391 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Spst4g02777 391 PANTHER RUST RESISTANCE KINASE LR10-RELATED 62 380 IPR045874 GO:0004672
Spst4g02777 391 MobiDBLite consensus disorder prediction 371 391 - -
Spst4g02777 391 ProSiteProfiles Protein kinase domain profile. 90 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02777 391 ProSitePatterns Protein kinases ATP-binding region signature. 96 118 IPR017441 GO:0005524
Spst4g02777 391 SUPERFAMILY Protein kinase-like (PK-like) 73 364 IPR011009 -
Spst4g02777 391 FunFam PR5-like receptor kinase 165 375 - -
Spst4g02777 391 CDD STKc_IRAK 96 365 - -
Spst4g02777 391 Gene3D Transferase(Phosphotransferase) domain 1 165 372 - -
Spst4g02777 391 FunFam serine/threonine-protein kinase PBS1-like 59 164 - -
Spst4g02777 391 MobiDBLite consensus disorder prediction 372 391 - -
Spst4g02777 391 Gene3D Phosphorylase Kinase; domain 1 53 164 - -
Spst4g02777 391 Pfam Protein kinase domain 93 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02777 391 SMART serkin_6 90 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02777 Spst-Chr4 67555239 67556790 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02777 62 388 Receptor kinase-like Gene Family AT5G38280 56.024 1.11e-123 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Spst4g02777 Pkinase 2.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02777 - - vra:106756549 659.448