Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02775 ATGGGAAGAGCAGAGAAAATGAAAGAAGTGTACAAACCACGAACAGATACAACGGACCTTTATAATCAAAGGAACGTGCCAGCCACGGTTTTCTCTCAATCTCATATTCTTCAACATGGCCCCTCTCAGATTTCTGCCATGCCTCATCCTCTTGTTCCACCTCCTTCTTCCCTCATAAACACCCTTTTCTTCTTGTCACTCTTCTTCCCAACATCTATATCTAGTGATGCTGAAGGTTACACAGCATGTGAACCTTTTAGCTGTGGGAAATTCAACAATATTAGGTACCCATTTTGGAGTAAGGACCAACAAGATTATTGTGGGCATCCAAAGTTCATGCTTGATTGCCAACAAGACAACGTGACAATTGACATCATGTCACAGACATTCCAAGTCATTGATATGGATCAGATATCTAAGGTTTTGAAGATTGCAAGGTTGGATTTATGGACCAACCCTTGTACTAATGACTATGTCAATGTTAAGTTGGATTCAAATTTCTTCAGCAACACTTCCAATGATGTTGAGTACACTTTGTTATATGACTGCGGCCCTCTTGGATATATGTCTAGCAGTGTGAATATGGAGGAGCAATACAATTTAATTGCCCCAATAGGTGGTGGTCTCCAAGCTGGATTCTTTGTGTTGAGTACTGAAGTGGTTAATTTCAATAGTCTGAGTTGCAAGAATGGCATCACTGTTTATGTTCTAAAAGAGGCTGTGAAGAATGATTCGGTTGTGGACAATGTTTTAGGAAGAGGATTTGAGGTTGGATGGAGTGGTGCTAATGAAGATCAATGTAATGGTTGCTCAAAATCTGGTGGGAGATGTGGACACAAAGCATCTATGGATGCATTTATGTGTCTCTGTCCTAATCAGCAATCTGATGGTGAGTTTTGTAAGAATATCCTAGCAAGGTCCCCAGAACCAACACCTAGATCAACACCAGAAAATGGGAAAAATGTGACAAGGCAGGCACAGCGAGAAAGAGGATATTCTCCTCCCGAAAAAAATTGGATATACCGCAAGTTAGAGCAAGATGAAGATTTGAGATCTGACGGGGTGATAACCACAGAAGAAAGAGAGACAGAAAGGAGAATGATTGTACTCTGTCCCAGGAAAGAAAGCATTTGTTCTATGTCTGACACTAGAAGGACACTGAAGTATGTTGCTCCAGAAATGGTAAATACTCATTCTGGTGGGGTTTCGCACAAGTCCGATGTTTATAGTTATGGGATGATGATGCTGCTAGAAGTGATAGGAGGGAGGAAGAACATAAATGTTGAAGCTAATCATACAAGTGATATACTTTCTCCATTTGATACAGAGGAGACTTGA 1338 0.4073 MGRAEKMKEVYKPRTDTTDLYNQRNVPATVFSQSHILQHGPSQISAMPHPLVPPPSSLINTLFFLSLFFPTSISSDAEGYTACEPFSCGKFNNIRYPFWSKDQQDYCGHPKFMLDCQQDNVTIDIMSQTFQVIDMDQISKVLKIARLDLWTNPCTNDYVNVKLDSNFFSNTSNDVEYTLLYDCGPLGYMSSSVNMEEQYNLIAPIGGGLQAGFFVLSTEVVNFNSLSCKNGITVYVLKEAVKNDSVVDNVLGRGFEVGWSGANEDQCNGCSKSGGRCGHKASMDAFMCLCPNQQSDGEFCKNILARSPEPTPRSTPENGKNVTRQAQRERGYSPPEKNWIYRKLEQDEDLRSDGVITTEERETERRMIVLCPRKESICSMSDTRRTLKYVAPEMVNTHSGGVSHKSDVYSYGMMMLLEVIGGRKNINVEANHTSDILSPFDTEET 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02775 445 Gene3D Transferase(Phosphotransferase) domain 1 367 442 - -
Spst4g02775 445 MobiDBLite consensus disorder prediction 304 338 - -
Spst4g02775 445 PANTHER OS01G0690200 PROTEIN 58 301 - -
Spst4g02775 445 MobiDBLite consensus disorder prediction 308 328 - -
Spst4g02775 445 Pfam Wall-associated receptor kinase galacturonan-binding 83 145 IPR025287 GO:0030247
Spst4g02775 445 SUPERFAMILY Protein kinase-like (PK-like) 377 420 IPR011009 -
Spst4g02775 445 ProSiteProfiles Protein kinase domain profile. 199 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02775 445 Pfam Wall-associated receptor kinase C-terminal 226 292 IPR032872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02775 Spst-Chr4 67541048 67547355 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02775 370 440 Receptor kinase-like Gene Family AT5G38260 49.296 1.28e-11 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Spst4g02775 WAK_assoc 9.2e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02775 - - gmx:102665158 352.058